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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gataccgtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG

Basic information

species Oryza sativa
transcript LOC_Os08g33920.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GRMZM2G152552_T01 (Zea mays), 3'ss of exon 2
gatacc---gtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtacttgaggatttata----cagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
  ||||        |  ||   | | ||| | | |   | |   | ||     ||| |||||||||  || | |   | | ||     | ||||    | | ||||||| || ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||| ||| |
--tacctgaacaatgccctcagtgtcaccaaaactgggtattcatctg-----tcattggatatttccacctaatattgtttaatgctattgtttccatatttccagATCCCTCACTTGAGGCCTGCTGAGTACAAAAGGTCCAGGTTGCCTAGGAGCCGCAGGACTGTGAACCGTCCTTATGGTGGAGTACTCTCTGGAATTGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GRMZM5G820996_T01 (Zea mays), 3'ss of exon 2
gataccgtttggttcttcatattaccgatattacttt-tctctatgctatttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
  || |   |   || |||| |     | ||    |  |   |   |||| | |   | | ||   | |  | | |      | | |||   | |||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||| |
actatc-cataaatcatcatttagttcacatggtctggtaatttctctatctgaacaggtcttaacagtcaatgctaatgctattcttcccatatctctagATCCCCCACTTGAGACCTGCCGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTTAACCGTCCTTATGGTGGAGTACTCTCTGGAATTGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA18G49340.1 (Glycine max), 3'ss of exon 2
-gataccgtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtact-tgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
    |  ||||  ||   |   ||| | | ||       |    |  |  |   |   ||      ||| | | |||||    |   |    |  ||| |||||||| ||||| || |||||||| ||||||||||| || ||| |||||||||||||||| || |||||  | ||||| || ||  | || ||    || |
cataagtgtttaattaacctgtttatccaaata--caccccaagtagtgatgagcaaaatgccataactatcatgattttctgatcctgacttactctgcagATTCCACACTTAAGACCTGCTGAATACAAGAGGTCTAGATTGCCTAGGAACCGCAGGACCGTAAACCGAGCCTATGGAGGTGTTTTATCCGGGGGAGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA09G37360.1 (Glycine max), 3'ss of exon 2
gataccgtttggttcttcatattaccgatattacttttctct-atgc-tatttcactggatat-ttgtact-tgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
       ||  ||| || ||   |   | ||  ||      | |||   |||   |   ||   ||||| | | | ||||| |  |   |    |  ||| |||||||| |||||||| |||||||| ||||||||||| || ||| || ||||||||||||| || |||||  | || || || ||  | || |||   || |
---ttaattaagttgtttat-ccaaatacatccctaagtagtgatgagcattgagcaatatgccttgtattatcatgattttttgatcctgacttaatctgcagATTCCACACTTGAGACCTGCTGAATACAAGAGGTCTAGATTGCCTCGGAACCGCAGGACCGTAAACCGAGCCTACGGAGGTGTTTTATCAGGAGGAGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA02G11920.1 (Glycine max), 3'ss of exon 2
--gataccgtttggttcttcatattaccgatattacttttctctatgct---atttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
  ||||   ||| |  ||| ||   |  || ||||  |||| || || |   ||   | |  |||| | |  |  |  | | ||  | || |  |   | | |||||||| |||||||||||||| ||||||||||| || |||||  | || ||||| |||||||| |||||| ||||||| |||||  | ||||||| ||| |
cagatatttttttgg-ctttatgcgagggacattatgtttc-ctgtgtttggataaaattatatatcttt-ttcaactactaattta-tgcttgacaat-tgcagATTCCACACTTGAGGCCTGCAGAGTACAAGAGATCAAGGTTACCCAGAAACCGTAGGACTGTCAACCGTGCATATGGCGGAGTTTTGTCTGGAAGTGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA01G05740.1 (Glycine max), 3'ss of exon 2
-gataccgtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
  | |   |||  | ||| |  | |  || ||||  ||||       |   | |    | || | |  || |   | ||     || |  |   | | |||||||| |||||||||||||| |||||||||||||| |||||  | || ||||| |||||||| |||||| |||||||||||||  | ||||||| ||| |
ccagatgtttttttgctttacgtgagggacattatgtttcctgtgtttggataaaattacatatctttttcaaattctaatttatgcttgacaat-tgcagATTCCACACTTGAGGCCTGCAGAGTACAAGAGGTCAAGGTTACCCAGAAACCGTAGGACTGTCAACCGTGCATATGGTGGAGTTTTATCTGGAAGTGCCG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT1G69620.1 (Arabidopsis thaliana), 3'ss of exon 2
-gataccgtttggttcttcatat-taccgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctatt--ttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
  | |  |||      ||  | |  |   || |||   ||      | | |||||   |  |||| | ||| || || ||     | |    ||  || |  ||||||| |||||||||||  ||||||||||||||||  | || || || ||| | ||||| ||||||||| | |||||||| ||  | |||||  |||| |
gtaaattgttcatagtttggtttacagtaatcttaaagttgatggagttgtttca---gccattt-tccttcagcatctaatttatatctctttggttgtttagATTCCTCACTTGAGGCCAACTGAGTACAAGAGGTCACGTTTATCAAGAAACAGGAGGACCGTGAACCGTGCTTATGGTGGGGTTTTGTCTGGTTCTGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT3G28900.1 (Arabidopsis thaliana), 3'ss of exon 2
-----gataccgtttggttcttcatattaccgatattacttttctctatgctatttcac-tggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
      |||   ||    ||   | |    | | |  || || || | |   | ||  | ||| |  ||   ||| |   | |||       | | |||||| |||||||| || ||||| |||||||||||||| ||||| |||||| | ||||||   ||||| ||||| ||| |||||||||| || || ||||||  ||| |
ttactcatatgcttaatctcaatagaacctcaaaaacacattcctttttttgaattagcatggtttcttaagctttactttctatg------tttgttttctgcagATTCCGCATTTGAGACCTGCTGAGTACAAAAGGTCAAGGTTGGCAAGGAACGAGAGGACAGTGAATCGTGCATATGGTGGTGTTCTATCTGGAGTTGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT1G26880.1 (Arabidopsis thaliana), 3'ss of exon 2
gataccgtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctat-tttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
  |   |  |   | ||||  |||     |    | |    |    |||   |  | |||||  |  |  |  || |  | |   || | | ||| | ||||| || |||||||||||  |||||||||||||||| || || || || ||| | |||||||| |||||  |||| ||||||||  | |||||  ||||||
-ctttggcataaattttcagtttattcccaactatatatgtttgattatgcaatggcatattccttttgcattatgtgaataactttgtttgtttattcagATCCCTCACTTGAGGCCCTCTGAGTACAAGAGGTCAAGATTATCAAGAAACAGGAGGACTGTAAACCGAGCATACGGTGGAGTCTTGTCTGGTTCTGCAG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: Vv14s0108g00850.t01 (Vitis vinifera), 3'ss of exon 2
---gataccgtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctattt-tctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
   |  |  ||||     |   | |    |  ||||      | ||| ||  |||| |   | | |  | ||     |||| | | | ||  || | ||| |||||||| ||| |||| |||||||| ||||||||||| || ||| | |||||||| ||||||||||||||  | ||||| || ||  | || ||   ||| |
gtggccagagttttcacttgtgtttacttgtgattagaaccatatattctgcttcaat---tgtgtcaattttttcttttaca-attctttgatctatctgcagATTCCTCACCTGAGACCTGCTGAATACAAGAGGTCTAGATTGCCAAGGAACCGTAGGACTGTGAACCGGGCCTATGGAGGTGTTTTGTCGGGTGGTGCTG

upper sequence: LOC_Os08g33920.1 (Oryza sativa), 3'ss of exon 2
lower sequence: Vv01s0026g02410.t01 (Vitis vinifera), 3'ss of exon 2
--gataccgtttggttcttcatattac----cgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
     ||  |||| |      ||||      | || |   || | |   |   |||||| || || |||| |  |||     || |  ||   |||| | || |||||||| ||| | || ||||| || ||||||||||| || ||  |||||||||| ||||||||||||||| | ||||| || ||| | ||||||  ||| |
actgcacattttgatagcatttattgtagcacaatttggtttgtatacttaaaatttcagtgcatttttggatgtga-----tagaatgttggctatgt-ctgcagATTCCTCACCTAAGACCTGCAGAATACAAGAGGTCTAGATTACCTAGGAACCGTAGGACTGTGAACCGTGCTTATGGGGGTGTGTTGTCTGGAGGTGCTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86421848|gb|CI059421.1|CI059421
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACGTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|163928141|gb|EG713573.1|EG713573
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|88981573|gb|CI027190.1|CI027190
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|8956388|gb|BE230175.1|BE230175
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGGAA
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGG-AA
EST: gi|7273822|gb|AU083366.1|AU083366
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|38470454|gb|CF954585.1|CF954585
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTCGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|88237405|gb|CI237254.1|CI237254
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|58669464|gb|CK058150.1|CK058150
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|55410863|gb|CV723239.1|CV723239
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|88982496|gb|CI027965.1|CI027965
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTTTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|56158237|gb|C91722.2|C91722
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|88719483|gb|CI742993.1|CI742993
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|88309305|gb|CI655313.1|CI655313
EST:     AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|15849588|gb|BI797850.1|BI797850
EST:     AGA-GGCGA-C-GGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGG                         ATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
genomic: AGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAAC
EST: gi|3762584|gb|AU029336.1|AU029336
EST:     TCACCGGGAA-AAGATCCAGGGG                         ATTCCCCACTTGAGNCCTGCTGAGTACAAGAGGTCCNAGGTTGTCTAGGAA
genomic: TCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC-AGGTTGTCTAGGAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 74 (upstream exon), 74 (downstream exon)
Score: 47

GTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGgtgagcgatg ... ttttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctatttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG
                                      tgttctattttctcc  CT-rich tract
            atatttgta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gataccgtttggttcttcatattaccgatattacttttctctatgctatttcactggatatttgtacttgaggatttatacagtgttctattttctccagATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - -tggttct
- - - - - - - - - - - - - - - - - - - ctctatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtacttg