1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tgtgaaaagaaaaaaaaaacattcccgactatgtttatgtcaaccacatgtaatttgcatatagcatcttatgatgtttgtattttgaatgatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAATTCCG
species | Oryza sativa |
transcript | LOC_Os07g32800.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88325173|gb|CI646593.1|CI646593
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33676891|gb|CF305130.1|CF305130
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33805109|gb|CF328432.1|CF328432
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|27577219|gb|CA999913.1|CA999913
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33680432|gb|CF308671.1|CF308671
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33684983|gb|CF313222.1|CF313222
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88372196|gb|CI641831.1|CI641831
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|38470484|gb|CF954615.1|CF954615
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACNTTATCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88415626|gb|CI589218.1|CI589218
genomic: GTTGGAGATGGCCAGGAC--T-TCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55440920|gb|CV733773.1|CV733773
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88330287|gb|CI658598.1|CI658598
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33662440|gb|CF293407.1|CF293407
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33817317|gb|CF334495.1|CF334495
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33658966|gb|CF281579.1|CF281579
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: CAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33688262|gb|CF316501.1|CF316501
genomic: CAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33672976|gb|CF301215.1|CF301215
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCTCTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCTGACAGAAEST: gi|33657649|gb|CF280263.1|CF280263
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|27576096|gb|CA998790.1|CA998790
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88325362|gb|CI675159.1|CI675159
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55441187|gb|CV733909.1|CV733909
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33658967|gb|CF281580.1|CF281580
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCTCTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33656988|gb|CF279602.1|CF279602
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|38479023|gb|CF963156.1|CF963156
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55412176|gb|CV724552.1|CV724552
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTTCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|38469948|gb|CF954079.1|CF954079
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GATCGGTTGGAGATGG-CAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33663342|gb|CF294309.1|CF294309
genomic: GATCGGTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88334193|gb|CI641244.1|CI641244
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33654936|gb|CF277550.1|CF277550
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|14191784|gb|AU183995.1|AU183995
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88977188|gb|CI024925.1|CI024925
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: AGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33684608|gb|CF312847.1|CF312847
genomic: AGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33672922|gb|CF301161.1|CF301161
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: AGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33682793|gb|CF311032.1|CF311032
genomic: AGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33655241|gb|CF277855.1|CF277855
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33656069|gb|CF278683.1|CF278683
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33661955|gb|CF292922.1|CF292922
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88240847|gb|CI238698.1|CI238698
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88307437|gb|CI643278.1|CI643278
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55414951|gb|CV727327.1|CV727327
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33688906|gb|CF317145.1|CF317145
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|4969227|gb|AU066131.1|AU066131
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33658993|gb|CF281606.1|CF281606
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCTCTTTCTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGATTTATTCAGACAGAAEST: gi|88575888|gb|CI670033.1|CI670033
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55410369|gb|CV722745.1|CV722745
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|86416168|gb|CI030179.1|CI030179
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: CTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33824950|gb|CF338279.1|CF338279
genomic: CTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33688056|gb|CF316295.1|CF316295
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33826074|gb|CF338843.1|CF338843
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33693404|gb|CF321643.1|CF321643
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33690347|gb|CF318586.1|CF318586
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33693405|gb|CF321644.1|CF321644
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33682792|gb|CF311031.1|CF311031
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: CAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|38468995|gb|CF953126.1|CF953126
genomic: CAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33655071|gb|CF277685.1|CF277685
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88308707|gb|CI653594.1|CI653594
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33826568|gb|CF339093.1|CF339093
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|2280785|gb|C25280.1|C25280
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55441185|gb|CV733908.1|CV733908
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: TTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33656599|gb|CF279213.1|CF279213
genomic: TTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: CAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33685965|gb|CF314204.1|CF314204
genomic: CAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|13420824|gb|AU174914.1|AU174914
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGNTCCGTGAGAAGTACTCAGACAGAAEST: gi|33817320|gb|CF334496.1|CF334496
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: CGATCGGTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33680632|gb|CF308871.1|CF308871
genomic: CGATCGGTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|86906123|gb|CI292654.1|CI292654
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33825635|gb|CF338630.1|CF338630
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55434778|gb|CV730513.1|CV730513
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33691313|gb|CF319552.1|CF319552
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33692731|gb|CF320970.1|CF320970
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33656913|gb|CF279527.1|CF279527
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33684452|gb|CF312691.1|CF312691
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33691086|gb|CF319325.1|CF319325
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|4969408|gb|AU066312.1|AU066312
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGNTCCGTGAGAAGTACTCAGACAGAAEST: gi|33682358|gb|CF310597.1|CF310597
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88355164|gb|CI651867.1|CI651867
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|33670500|gb|CF298739.1|CF298739
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCTA-CTCNC-CTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|55411604|gb|CV723980.1|CV723980
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACTTTTTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|86899287|gb|CI298132.1|CI298132
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88575414|gb|CI669559.1|CI669559
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|2311820|gb|C27975.1|C27975
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAAEST: gi|88310832|gb|CI659435.1|CI659435
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
EST: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGG AAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
genomic: GTTGGAGATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGgtttgttgct ... gatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAA
acatgtaatttgcatatagcatcttatgatgtttgtattttgaatgatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAATTCCG
tattttgaatgatatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgtgaaaagaaaaaaaaaacattcccgactatgtttatgtcaaccacatgtaatttgcatatagcatcttatgatgtttgtattttgaatgatattgcagAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAATTCCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT