1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtttgcttgaataactgattggagactttatcaatagttcctgttgggagtggccagctgctttatataacttcgtttgttacttctttgtttcatctcccagAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCACTGGAGTATCTTTATCTTCTACAACCATGAAAACGGCAGAAATGGGATCA
species | Oryza sativa |
transcript | LOC_Os07g07250.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAG AACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCACEST: gi|29616632|gb|CB621644.1|CB621644
genomic: ATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGgtttgcttga ... catctcccagAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCAC
EST: ATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAG AACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCACEST: gi|29660022|gb|CB656297.1|CB656297
genomic: ATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGgtttgcttga ... catctcccagAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCAC
EST: ATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAG AACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCAC
genomic: ATGTTGCACTGGAGGAGCTCAACCGTTTGAAGGAGATTATTGATTCAAAGgtttgcttga ... catctcccagAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCAC
agtggccagctgctttatataacttcgtttgttacttctttgtttcatctcccagAACTTCTCTTCACCGCTAAATCAGCTTCAGAATAGGATATGGCTGATGCACTGGAGTATCTTTATCTTCTACAACCATGAAAACGGCAGAAATGGGATCA
atataac putative branch site (score: 12)
ttacttctttgtttca putative PPT
tttatataactt TA-rich tract