1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tttttcaaggaaaaaaaaagtggtcttgtgaacaccgtggcttctaagggtttgggatgctttcactttacatgacctcactttcattgttctgctgcagGACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTGAGACATTTCCAAATTCATTCACTAGTTTCTCAACTGGTCAACCTTGCAT
species | Oryza sativa |
transcript | LOC_Os06g03760.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGTCGCCGTCTCCGCGGTGGTTTGCGGCCTCATCCTCGGCATCCTATACG GACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTGEST: gi|58671154|gb|CK059840.1|CK059840
genomic: GGTCGCCGTCTCCGCGGTGGTTTGCGGCCTCATCCTCGGCATCCTATACGgtgcggatca ... tctgctgcagGACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTG
EST: GGTCGCCGTCTCCGCGGTGGTTTGCGGCCTCATCCTCGGCATCCTATACG GACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTGEST: gi|58667548|gb|CK056234.1|CK056234
genomic: GGTCGCCGTCTCCGCGGTGGTTTGCGGCCTCATCCTCGGCATCCTATACGgtgcggatca ... tctgctgcagGACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTG
EST: GGTCGCCGTCTCCGCGGTGGTTTGCGGCCTCATCCTCGGCATCCTATACG GACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTGEST: gi|88730217|gb|CI753832.1|CI753832
genomic: GGTCGCCGTCTCCGCGGTGGTTTGCGGCCTCATCCTCGGCATCCTATACGgtgcggatca ... tctgctgcagGACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTG
EST: TTGCGGCCTCATCCTCGGCATCCTATACG GACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTG
genomic: TTGCGGCCTCATCCTCGGCATCCTATACGgtgcggatca ... tctgctgcagGACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTG
aagggtttgggatgctttcactttacatgacctcactttcattgttctgctgcagGACTTGTTGGCAAAGTGGACTTCACTGTCAGGCATCTTTCTTCAGCAGTTGAGACATTTCCAAATTCATTCACTAGTTTCTCAACTGGTCAACCTTGCAT
acctcac putative branch site (score: 3)
ttgttct putative PPT
tttacat TA-rich tract