1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gcaagctgctgctgttcatcgccatggttttttaagctaaagcagaaagaatggttcatgattctgcttgcgttaattttttttctgaacaatttaatgacgagatcaagatttgggcgtggcagAATCGGAGCACGGCATCTTCAACTCCATCTTGAGAGGGCATGTCGACTTCAGCAGCGAGCCATGGTCGCGCATCTCGCATGGCGCCAAGGACCTTGTCAG
species | Oryza sativa |
transcript | LOC_Os05g41270.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CGGCGTCATGCTCTACATCCTTCTCTGCGGAGTTCCTCCCTTCTGGGCAG AATCGGAGCACGGCATCTTCAACTCCATCTTGAGAGGGCATGTCGACTTCA
genomic: CGGCGTCATGCTCTACATCCTTCTCTGCGGAGTTCCTCCCTTCTGGGCAGgcaagctgct ... ggcgtggcagAATCGGAGCACGGCATCTTCAACTCCATCTTGAGAGGGCATGTCGACTTCA
cgttaattttttttctgaacaatttaatgacgagatcaagatttgggcgtggcagAATCGGAGCACGGCATCTTCAACTCCATCTTGAGAGGGCATGTCGACTTCAGCAGCGAGCCATGGTCGCGCATCTCGCATGGCGCCAAGGACCTTGTCAG
atttaat putative branch site (score: 5)
attttttttctgaaca TA-rich tract