1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgattgtaatttcgttgtatcgttggaactctgcttgtgctttctaggatttttgattgttctgtccgcgtctgatactcgttatcttgtctgtgcgaagGCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTCGTCATCATATTCGTCATCACCGTGTTCCTGGCGGCGCTCGACTTCTGGG
species | Oryza sativa |
transcript | LOC_Os05g06700.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCGAGANCTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAG GCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTCEST: gi|88419596|gb|CI686814.1|CI686814
genomic: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAGgtgattgtaa ... ctgtgcgaagGCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTC
EST: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAG GCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTCEST: gi|88577787|gb|CI674397.1|CI674397
genomic: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAGgtgattgtaa ... ctgtgcgaagGCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTC
EST: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAG GCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTCEST: gi|88402439|gb|CI596300.1|CI596300
genomic: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAGgtgattgtaa ... ctgtgcgaagGCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTC
EST: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAG GCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTC
genomic: CCGAGAACTATGCCAATCCTGTGACGTGCCTCTTTCATGTGCTCTTCAAGgtgattgtaa ... ctgtgcgaagGCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTC
aggatttttgattgttctgtccgcgtctgatactcgttatcttgtctgtgcgaagGCTGGGGCGCTGGTGTTCTACATCTTGTTTTCGCTCTTCGTGAAGAGCTTCGTCATCATATTCGTCATCACCGTGTTCCTGGCGGCGCTCGACTTCTGGG
gtctgat putative branch site (score: 24)
tcttgtct putative PPT
ttttgatt TA-rich tract