1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgagttcctgtgttgcggattgatctatgtggttttgttttttaacatgaatgcactgtgtccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG
species | Oryza sativa |
transcript | LOC_Os05g04630.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29676557|gb|CB672832.1|CB672832
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAACAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58695107|gb|CK083794.1|CK083794
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88385710|gb|CI566572.1|CI566572
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCAGAGCAGATACCACTCGAEST: gi|58662934|gb|CK051620.1|CK051620
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29615431|gb|CB620443.1|CB620443
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29678514|gb|CB674789.1|CB674789
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88298738|gb|CI565935.1|CI565935
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAAGCTGTGGGTTC-TTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCAGAGCAGATACAAGTCGAAAA-GTCGAGCTCTTACEST: gi|33677805|gb|CF306044.1|CF306044
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29634261|gb|CB639270.1|CB639270
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58661163|gb|CK049843.1|CK049843
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACEST: gi|29680077|gb|CB676352.1|CB676352
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|117234267|gb|CT842364.1|CT842364
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGAGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|426282|gb|D22144.1|D22144
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33683171|gb|CF311410.1|CF311410
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29676212|gb|CB672487.1|CB672487
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|4714998|gb|AU056115.1|AU056115
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88350354|gb|CI623292.1|CI623292
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAAEST: gi|33655682|gb|CF278296.1|CF278296
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58593759|gb|CF992067.1|CF992067
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCCAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58588210|gb|CF986518.1|CF986518
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: GCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTAGCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58672443|gb|CK061129.1|CK061129
genomic: GCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: CCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33676712|gb|CF304951.1|CF304951
genomic: CCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58689178|gb|CK077865.1|CK077865
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88344894|gb|CI625740.1|CI625740
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAAC-TGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACEST: gi|58660269|gb|CK048949.1|CK048949
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58695208|gb|CK083895.1|CK083895
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29678428|gb|CB674703.1|CB674703
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29636076|gb|CB641085.1|CB641085
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58692954|gb|CK081641.1|CK081641
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58694420|gb|CK083107.1|CK083107
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29638564|gb|CB643573.1|CB643573
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88299000|gb|CI568003.1|CI568003
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCAEST: gi|58606761|gb|CK034794.1|CK034794
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29676404|gb|CB672679.1|CB672679
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33654351|gb|CF276965.1|CF276965
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|27577353|gb|CB000048.1|CB000048
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88395826|gb|CI593028.1|CI593028
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAAACTGTGGGTTC-TTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACEST: gi|33670080|gb|CF298319.1|CF298319
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29680749|gb|CB677024.1|CB677024
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|25799139|gb|CA755100.1|CA755100
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29619013|gb|CB624025.1|CB624025
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88425206|gb|CI564723.1|CI564723
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGGAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCAACAGAAGATACAAATCGAAEST: gi|88360265|gb|CI611984.1|CI611984
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCEST: gi|29646767|gb|CB651774.1|CB651774
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88421889|gb|CI609767.1|CI609767
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACEST: gi|88357474|gb|CI623528.1|CI623528
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTAEST: gi|88423863|gb|CI609894.1|CI609894
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGAAGATAAAACTCEST: gi|33654754|gb|CF277368.1|CF277368
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88428546|gb|CI565014.1|CI565014
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGGAGATA-AACTCGAAAAAGTCGAGCTCTTACEST: gi|58608482|gb|CK036515.1|CK036515
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58689258|gb|CK077945.1|CK077945
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58612283|gb|CK039995.1|CK039995
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29615278|gb|CB620290.1|CB620290
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|84117024|gb|CD150791.1|CD150791
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58693366|gb|CK082053.1|CK082053
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29667624|gb|CB663899.1|CB663899
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29632395|gb|CB637404.1|CB637404
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58687763|gb|CK076450.1|CK076450
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58608866|gb|CK036899.1|CK036899
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88451442|gb|CI565495.1|CI565495
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATA-AACCTCGAAAAAGTCGAGCTCTTAEST: gi|33795126|gb|CF323436.1|CF323436
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAAC-TCGAAAAAGTCGAGCTCTTA
EST: ACACTGGAAGCTCCA-CCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTT-CEST: gi|29645305|gb|CB650312.1|CB650312
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88367370|gb|CI566336.1|CI566336
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACA-CTCGAAAAEST: gi|29635393|gb|CB640402.1|CB640402
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29616093|gb|CB621105.1|CB621105
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58690622|gb|CK079309.1|CK079309
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29634391|gb|CB639400.1|CB639400
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29638609|gb|CB643618.1|CB643618
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58692931|gb|CK081618.1|CK081618
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|2312447|gb|C28602.1|C28602
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33684656|gb|CF312895.1|CF312895
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTCCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29642216|gb|CB647223.1|CB647223
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|27577332|gb|CB000027.1|CB000027
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58591597|gb|CF989905.1|CF989905
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33666702|gb|CF297669.1|CF297669
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58691118|gb|CK079805.1|CK079805
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29675833|gb|CB672108.1|CB672108
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29643726|gb|CB648733.1|CB648733
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29616174|gb|CB621186.1|CB621186
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|86596757|gb|CI286670.1|CI286670
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33655718|gb|CF278332.1|CF278332
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88411247|gb|CI564368.1|CI564368
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCACCAAAATGCTATTTTTCG ATAGCATGCTACCTCCAEST: gi|88402940|gb|CI568714.1|CI568714
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCA
EST: ACCTGGAAGCCTCCACCCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTAGCTCCACAGCAGATACAACTCGAA
genomic: AC-TGGAAGC-TCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAA
tccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG
gtctgat putative branch site (score: 4)
tttctat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgagttcctgtgttgcggattgatctatgtggttttgttttttaacatgaatgcactgtgtccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG