1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaatgttctattgcttgacaaatgtttctagcctttgtaattgaggatttatacataaagttattcttttaatgttttactgtattattttgcagGATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCTGCAATGGACGGGCTTCTGAAAATATTCAATTCATATGTCAATCTGCTCA
species | Oryza sativa |
transcript | LOC_Os03g58970.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCCAACCTAAGCTCTCAAACAGTGGCCATCGCTTCAGTTCAATGGTTCAG GATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCTEST: gi|29686700|gb|CB682975.1|CB682975
genomic: TCCAACCTAAGCTCTCAAACAGTGGCCATCGCTTCAGTTCAATGGTTCAGgtaatgttct ... tattttgcagGATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCT
EST: TCCAACCTAAGCTCTCAAACAGTGGCCATCGCTTCAGTTCAATGGTTCAG GATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCT
genomic: TCCAACCTAAGCTCTCAAACAGTGGCCATCGCTTCAGTTCAATGGTTCAGgtaatgttct ... tattttgcagGATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCT
ttgaggatttatacataaagttattcttttaatgttttactgtattattttgcagGATTTCTTTGAGGATGTTGGCCCACTGCATAGCTTGCAGTTAGGTGGTTCTGCAATGGACGGGCTTCTGAAAATATTCAATTCATATGTCAATCTGCTCA
ttttaat putative branch site (score: 10)
ttatttt putative PPT
ataaagttattctttt TA-rich tract