1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagctttctgcttcttgtcacttatgtcaccaataacatttaccaagtacccctgttacgaaatatgctaatatgttatttgaacgtgtactaaaacatgaacatttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGTCTTGCGAAAGATCGACCAGCGATTCATTTGCATGAGGTCGTTCATTGT
species | Oryza sativa |
transcript | LOC_Os03g13540.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|88397991|gb|CI585494.1|CI585494
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATEST: gi|58593522|gb|CF991830.1|CF991830
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCAT
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|58587652|gb|CF985960.1|CF985960
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|88310928|gb|CI659531.1|CI659531
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCAEST: gi|58685580|gb|CK074267.1|CK074267
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCA
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|117234872|gb|CT847928.1|CT847928
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|58659633|gb|CK048313.1|CK048313
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|58608007|gb|CK036040.1|CK036040
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGEST: gi|87009731|gb|CI310834.1|CI310834
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
EST: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGG TGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
genomic: GTTTACCGATATCTACACGGCAAAGAGCTTGCAGAAGCCATGGTACCTGGgtaagctttc ... atttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAG
cgaaatatgctaatatgttatttgaacgtgtactaaaacatgaacatttcttcagTGCTGGGAAATCATGACTACAGGGGTGATGTGCTAGCACAGCTTAGCCCAGTCTTGCGAAAGATCGACCAGCGATTCATTTGCATGAGGTCGTTCATTGT
tactaaa putative branch site (score: 97)
catttcttc putative PPT
taatatgttatttgaa TA-rich tract