Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcacgcgcgccgctggccttccgctcgcccccgctccgatctgctgttcctttagattctagggtttcttcttagcttgttggtatggcttgtgatgacgcgggtgcgcgtgcgtgtgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG

Basic information

species Oryza sativa
transcript LOC_Os02g47870.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g47870.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GRMZM2G361074_T01 (Zea mays), 3'ss of exon 2
gtgagcacgcgcgccgctggccttccgctcgcccccgctccgatctgctgttcctttagattctagggtttcttcttagcttgttggtatggcttgtgatgacgcgggtgcgcgtgcgtgtgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG
|||||||||| |||| || |   | |  || ||              || ||  ||  | || |  | |||  ||| | || |         |||||  || |   ||| |||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
gtgagcacgc-cgcccctcgttcttccttcccctt------------ctatttgttctggttttgtgctttgatctaacctcg---------cttgttgtggc---ggtccgcgtctgtctgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG

upper sequence: LOC_Os02g47870.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA12G32060.3 (Glycine max), 3'ss of exon 2
gtgagcacgcgcgccgctggccttccgctcgccc-ccgctccgatctgctgttcctttagattctagggtttcttcttagcttgttggtatggcttgtgatgacgcgggtgcgcgtgcgtgtgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG
                          |   ||       | | |  |  |||  || |   || |  | | || | ||    |    | ||  | |     ||   | ||  |  | |     | || |||| || ||||||||||| |||||||| |||||||| |||||||| ||||| || |||||||
--------------------------gtaagcgtgttaattcaacttattgt--ctgtgtgttgtgagttatcgtttt--tctaagagaataacctaattcgatttgagtttgattac-----tggtttagGTATTGAGTGCCAGGCCAACCAGGCTAGCGCCACTAGCGAGGAATGCACTGTAGCTTGGG

upper sequence: LOC_Os02g47870.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA12G32060.2 (Glycine max), 3'ss of exon 2
gtgagcacgcgcgccgctggccttccgctcgccc-ccgctccgatctgctgttcctttagattctagggtttcttcttagcttgttggtatggcttgtgatgacgcgggtgcgcgtgcgtgtgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG----------------------------------------
                          |   ||       | | |  |  |||  || |   || |  | | || | ||    |    | ||  | |     ||   | ||  |  | |     | || |||| || ||||||||||| |||||||| |||||||| |||||||| ||||| || |||||||                                        
--------------------------gtaagcgtgttaattcaacttattgt--ctgtgtgttgtgagttatcgtttt--tctaagagaataacctaattcgatttgagtttgattac-----tggtttagGTATTGAGTGCCAGGCCAACCAGGCTAGCGCCACTAGCGAGGAATGCACTGTAGCTTGGGGTACGCTCTGAAGCCCTTTAATATTCTCCTGTTAAATGCG

upper sequence: LOC_Os02g47870.1 (Oryza sativa), 3'ss of exon 2
lower sequence: EFJ06425 (Selaginella moellendorffii), 3'ss of exon 1
gtgagcacgcgcgccgctggccttccgctcgcccccgctccgatctgctgttcctttagattctagggtttcttcttagcttgttg-gtatggct-tgtgatgacgcgggtgcgcgtgcgtgtgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG
                   |      | | |    |  |  ||     | |   |   |         ||||| |  |  |||| | | |   ||  | |||    |||   | | | | ||  |    |  |||||||||||||||| |||||||| |||||||| ||||| || |||||           
-------------------gtaaggggattgtttgcattgtgagagattatcgatcgcgccctc----tttctccagACATTGTGGTGGACAACTGCGCGATTTGCCGGAATCACAT-CATGGATC---TGTGCATCGAGTGCCAGGCAAACCAGGCCAGCGCCACGAGCGAAGAATGCAC-----------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86602211|gb|CI262680.1|CI262680
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86824548|gb|CI263034.1|CI263034
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88584483|gb|CI702038.1|CI702038
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|87026736|gb|CI254842.1|CI254842
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGCGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88310527|gb|CI659317.1|CI659317
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|163929443|gb|EG713412.1|EG713412
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|58586941|gb|CF985249.1|CF985249
EST:     ATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGCACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACC
genomic: ATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGG-ACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACC
EST: gi|88537330|gb|CI465161.1|CI465161
EST:     TGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: TGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88355555|gb|CI679275.1|CI679275
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86897276|gb|CI294334.1|CI294334
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88591378|gb|CI707408.1|CI707408
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88577100|gb|CI673655.1|CI673655
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55434732|gb|CV730490.1|CV730490
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86531631|gb|CI171837.1|CI171837
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88572104|gb|CI663675.1|CI663675
EST:     CATCGTCGTGGACAANTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88398748|gb|CI598713.1|CI598713
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88329496|gb|CI648558.1|CI648558
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|58585864|gb|CF984172.1|CF984172
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGGGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88477901|gb|CI415172.1|CI415172
EST:     TCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: TCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86534249|gb|CI174455.1|CI174455
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55434734|gb|CV730491.1|CV730491
EST:     TGCGCCATCTGCCGCAACCACATCATGGACCTNT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: TGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86431314|gb|CI084925.1|CI084925
EST:     TATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|3759878|gb|C97136.1|C97136
EST:     CCACATCATGGACCNCT                         GCATCGAGTGCCA-GCGAACCAGGCGAGCGCCACCNGCGAGGANTGCACCG
genomic: CCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88503232|gb|CI430738.1|CI430738
EST:     GCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55441579|gb|CV734113.1|CV734113
EST:     CATCGTCGTGGGCAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88344293|gb|CI655687.1|CI655687
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88346056|gb|CI633929.1|CI633929
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGNGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88976245|gb|CI024462.1|CI024462
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88305115|gb|CI652052.1|CI652052
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88252851|gb|CI350276.1|CI350276
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88556594|gb|CI486932.1|CI486932
EST:     CATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88848550|gb|CI087072.1|CI087072
EST:     GATCGTCGTGGACAACTGCGCTATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGTACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88523676|gb|CI451524.1|CI451524
EST:     CGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88238846|gb|CI236697.1|CI236697
EST:     GTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88385361|gb|CI630462.1|CI630462
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88483270|gb|CI420541.1|CI420541
EST:     CGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88410530|gb|CI686468.1|CI686468
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGCCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88484351|gb|CI421622.1|CI421622
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|38478406|gb|CF962539.1|CF962539
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88556822|gb|CI487179.1|CI487179
EST:     TGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: TGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|5004079|gb|AU069228.1|AU069228
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88717453|gb|CI740963.1|CI740963
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88540782|gb|CI468852.1|CI468852
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88556939|gb|CI487304.1|CI487304
EST:     CGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88466397|gb|CI529806.1|CI529806
EST:     ACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: ACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88488493|gb|CI425764.1|CI425764
EST:     AACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: AACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88526824|gb|CI454913.1|CI454913
EST:     TGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: TGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88538461|gb|CI467494.1|CI467494
EST:     GGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88451823|gb|CI694594.1|CI694594
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|25800584|gb|CA756545.1|CA756545
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|15851044|gb|BI799320.1|BI799320
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88503235|gb|CI430741.1|CI430741
EST:     GCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55437350|gb|CV731894.1|CV731894
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88538806|gb|CI467867.1|CI467867
EST:     GCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|33808930|gb|CF330351.1|CF330351
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88360682|gb|CI647692.1|CI647692
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGGCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88294972|gb|CI522926.1|CI522926
EST:     CTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88762328|gb|CI771884.1|CI771884
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88571713|gb|CI663086.1|CI663086
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88210386|gb|CI210235.1|CI210235
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88289393|gb|CI555755.1|CI555755
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88310490|gb|CI659280.1|CI659280
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88338016|gb|CI676999.1|CI676999
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86832305|gb|CI307521.1|CI307521
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88463910|gb|CI527237.1|CI527237
EST:     CCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86846893|gb|CI283052.1|CI283052
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGGGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88424041|gb|CI689740.1|CI689740
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86820890|gb|CI357631.1|CI357631
EST:     AATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|33808928|gb|CF330350.1|CF330350
EST:     TCATGGACCTTT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGAGAGTGCACC
genomic: TCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAG-GAGTGCACC
EST: gi|88348428|gb|CI629917.1|CI629917
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|58607531|gb|CK035564.1|CK035564
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88344290|gb|CI655684.1|CI655684
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|218496814|gb|FG947952.1|FG947952
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55441581|gb|CV734114.1|CV734114
EST:     CATGGACCTTT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88543776|gb|CI473812.1|CI473812
EST:     ACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: ACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88358824|gb|CI649373.1|CI649373
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCACGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55433516|gb|CV729865.1|CV729865
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88530088|gb|CI457424.1|CI457424
EST:     ACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: ACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88485324|gb|CI422595.1|CI422595
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88282992|gb|CI404240.1|CI404240
EST:     CATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86534541|gb|CI174747.1|CI174747
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88511991|gb|CI439497.1|CI439497
EST:     ACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: ACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88278569|gb|CI399569.1|CI399569
EST:     GCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88340685|gb|CI647563.1|CI647563
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55438491|gb|CV732542.1|CV732542
EST:     NATCGTCGTGGACAANTGCGCCATCTGCCGCAACCACATCATGGACCTNT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|55438489|gb|CV732541.1|CV732541
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|87019232|gb|CI279742.1|CI279742
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|15008499|gb|AU222887.1|AU222887
EST:     TCGTGGACAACTGCGCCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: TCGTGGACAACTGCG-CCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88480620|gb|CI417891.1|CI417891
EST:     ATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: ATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88438729|gb|CI546211.1|CI546211
EST:     CGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|86889691|gb|CI299889.1|CI299889
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88313926|gb|CI599928.1|CI599928
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88739428|gb|CI762936.1|CI762936
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88507265|gb|CI434771.1|CI434771
EST:     AACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: AACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88848429|gb|CI086951.1|CI086951
EST:     NATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCAACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|10423655|gb|AU108186.1|AU108186
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88988503|gb|CI037740.1|CI037740
EST:     CCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|56158480|gb|AU088576.2|AU088576
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88305570|gb|CI631937.1|CI631937
EST:     NATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88256243|gb|CI358631.1|CI358631
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|568841|gb|D39690.1|D39690
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88590651|gb|CI707528.1|CI707528
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88512714|gb|CI440220.1|CI440220
EST:     CCATGTGCCGCAACCACATCATGGACCTCT                         GCATGGAGTGCCAGGCGGACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|58687844|gb|CK076531.1|CK076531
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88507295|gb|CI434801.1|CI434801
EST:     GCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: GCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
EST: gi|88589297|gb|CI707165.1|CI707165
EST:     CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCT                         GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG
genomic: CATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 51 (upstream exon), 60 (downstream exon)
Score: 25

ACATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTgtgagcacgc ... tgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
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gtgagcacgcgcgccgctggccttccgctcgcccccgctccgatctgctgttcctttagattctagggtttcttcttagcttgttggtatggcttgtgatgacgcgggtgcgcgtgcgtgtgttgtgtagGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG