1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ggatccactagttcatgcctcaattttttttctcctcttttaagttttccaaagagctacattgttgtaaagtgtctgatacaattgattgtttattcagGTTAGCGCTTTTGGCGTGTGATTGATTTCTAAACGAATTTTGGGCCGTGAGGGGAAGTTCAATCATGGCAGGGTCTCTTGCCGCCTCAGCATTCTTCCCA
species | Oryza sativa |
transcript | LOC_Os02g43090.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAGACCTTATATATGTCAGCTACTATAAATCAACTTCATGATTTCATAAG GTTAGCGCTTTTGGCGTGTGATTGATTTCTAAACGAATTTTGGGCCGTGAG
genomic: CAGACCTTATATATGTCAGCTACTATAAATCAACTTCATGATTTCATAAGgtgattttct ... gtttattcagGTTAGCGCTTTTGGCGTGTGATTGATTTCTAAACGAATTTTGGGCCGTGAG
tttccaaagagctacattgttgtaaagtgtctgatacaattgattgtttattcagGTTAGCGCTTTTGGCGTGTGATTGATTTCTAAACGAATTTTGGGCCGTGAGGGGAAGTTCAATCATGGCAGGGTCTCTTGCCGCCTCAGCATTCTTCCCA
aattgat putative branch site (score: 4)
tttattc putative PPT
aattgattgtttatt TA-rich tract