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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgttcctgattaattctgttcatgcatgtgtactttttaattcagGAGCTACGCATTCCTTTATATCAAGAGATTTTGTGGCAAAACACCAAATAAGGGTAGAAGATCTTAGCAAACCTATGATAGTATCAACCCCAGGAAGCCA

Basic information

species Oryza sativa
transcript LOC_Os02g22300.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtacgttcctgattaattctgttcatgcatgtgtactttttaattcagGAGCTACGCATTCCTTTATATCAAGAGATTTTGTGGCAAAACACCAAATAAGGGTAGAAGATCTTAGCAAACCTATGATAGTATCAACCCCAGGAAGCCA
                                            ttttaat  putative branch site (score: 3)
                                        tacttttt  CT-rich tract
                                      tgtactttttaatt  TA-rich tract