1 5' 3' | 2 5' 3' |
gtaaatatgatgacaaagtttacttactggccattaacattttttttcacgtgaagctgttttatgacatctgcacgcattttgacttgcctcaattgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGACTAGGTTTGACAGACAAGTCGCCAAATTCATGGGACATCTATGATCCA
species | Oryza sativa |
transcript | LOC_Os02g02350.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGEST: gi|29666902|gb|CB663177.1|CB663177
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAN GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGEST: gi|218500348|gb|FG955858.1|FG955858
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGEST: gi|29686687|gb|CB682962.1|CB682962
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACEST: gi|58685880|gb|CK074567.1|CK074567
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTAC
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGEST: gi|29666903|gb|CB663178.1|CB663178
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGEST: gi|218495281|gb|FG959556.1|FG959556
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGEST: gi|33796083|gb|CF323908.1|CF323908
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
EST: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAG GTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
genomic: GATGCCTCATCAAATTGCTGGAGCAGTGTAGCTCCAATGCCTACTGCTAGgtaaatatga ... ttgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGG
gtgaagctgttttatgacatctgcacgcattttgacttgcctcaattgttttcagGTGCTATTTTGTTTCTGCAGCTCTGGACAAGAAACTATACATTACTGGTGGACTAGGTTTGACAGACAAGTCGCCAAATTCATGGGACATCTATGATCCA
ttttgac putative branch site (score: 10)
ttgttttc putative PPT
aattgtttt TA-rich tract