1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgagtgttaatgtggctatatttagatggatggatgaatcctcgtatctgttgatgttaaacagcgaactggatttgtaaattgctccaatgtctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCCTTGCATAAGGTGGTCGAGGCTGAGGACATTGCTGAGAAGACAGGGCTT
species | Oryza sativa |
transcript | LOC_Os01g68770.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|29644288|gb|CB649295.1|CB649295
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|58669621|gb|CK058307.1|CK058307
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|29641234|gb|CB646241.1|CB646241
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|29642049|gb|CB647056.1|CB647056
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|33677794|gb|CF306033.1|CF306033
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTC-GTCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|29660708|gb|CB656983.1|CB656983
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCEST: gi|14571328|gb|BI118696.1|BI118696
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
EST: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCT GTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
genomic: CATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTgtgagtgtta ... tctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGC
ctgttgatgttaaacagcgaactggatttgtaaattgctccaatgtctgttgcagGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCCTTGCATAAGGTGGTCGAGGCTGAGGACATTGCTGAGAAGACAGGGCTT
tgttgat putative branch site (score: 28)
atttgtaaatt TA-rich tract