1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gggttgctttctgaattgttctttaccaattattatttgatgcccaaataattactgtaagaagtcgctgtctgactgtttcttctataccttctttcagGGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGTCGAAAAATTTGATGTCTTTGTCCTAGAGAAAAGCTCTGGTTGCAAGTTC
species | Oryza sativa |
transcript | LOC_Os01g65780.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATGGGTTCTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGC GGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGTEST: gi|29630115|gb|CB635124.1|CB635124
genomic: ATGGGTTCTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGCgtaagatctc ... cttctttcagGGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGT
EST: ATGGGTTCTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGC GGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGTEST: gi|33794578|gb|CF323176.1|CF323176
genomic: ATGGGTTCTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGCgtaagatctc ... cttctttcagGGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGT
EST: ATGGGTTCTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGC GGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGTEST: gi|13420432|gb|AU174522.1|AU174522
genomic: ATGGGTTCTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGCgtaagatctc ... cttctttcagGGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGT
EST: CTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGC GGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGT
genomic: CTTTGGAGACGACGAACACGCGGTACCGGCCGGCCGGAGCAGCgtaagatctc ... cttctttcagGGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGT
aaataattactgtaagaagtcgctgtctgactgtttcttctataccttctttcagGGATGACACAGCTAAGAGAAGGACCCAGAAAAGCAAAAGTTTCAAAGAGGTCGAAAAATTTGATGTCTTTGTCCTAGAGAAAAGCTCTGGTTGCAAGTTC
gtctgac putative branch site (score: 7)
ctgtttcttctatacc CT-rich tract
ttctata TA-rich tract