1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtagcctacattttgcactaacactatggcactacatttgctgggctagggaactttgctgattaaaactaaatgttttctcgaaagcttcagATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCCTGGGTTCTAGAATCCGGACTGTTTCCTCTCCACATCCTATCCCGTGCAT
species | Oryza sativa |
transcript | LOC_Os01g62810.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TAAAATAATGGCAGTAGCTGCTGGTGGTCGTCATACATTAGCACTATCAG ATTTAGGCCAAGTATGGGGTTTGGGCTATGGAGGAGAAGG-CAACTAGGCC
genomic: TAAAATAATGGCAGTAGCTGCTGGTGGTCGTCATACATTAGCACTATCAGgtagcctaca ... aaagcttcagATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCC
tgctgggctagggaactttgctgattaaaactaaatgttttctcgaaagcttcagATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCCTGGGTTCTAGAATCCGGACTGTTTCCTCTCCACATCCTATCCCGTGCAT
aactaaa putative branch site (score: 11)
attaaaactaaatgtt TA-rich tract