1 5' 3' | 2 5' 3' |
...ctatcatgctattggaattataataagctacaatgaaaccatgattatgtttttagttcttgtatatacttgttttttgacacattatatatctctatagGTCTGTGATTAGTGACAATGGAGGGTGTCTGAGATGAAGACATGCTAGTATTTACTTTGTCATTTCTGTTGCTTCATGTTTTATCACTTTGTAATTCGTG
species | Oryza sativa |
transcript | LOC_Os01g55020.4 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTCGCTCCTCGCTGCCCCTGCGTGCAGGAGCTTTGGCTGGCTCTCCGAAG GTCTGTGATTAGTGACAATGGAGGGTGTCTGAGATGAAGACATGCTACTAT
genomic: GTCGCTCCTCGCTGCCCCTGCGTGCAGGAGCTTTGGCTGGCTCTCCGAAGgtaataattt ... atctctatagGTCTGTGATTAGTGACAATGGAGGGTGTCTGAGATGAAGACATGCTAGTAT
tatgtttttagttcttgtatatacttgttttttgacacattatatatctctatagGTCTGTGATTAGTGACAATGGAGGGTGTCTGAGATGAAGACATGCTAGTATTTACTTTGTCATTTCTGTTGCTTCATGTTTTATCACTTTGTAATTCGTG
ttttgac putative branch site (score: 2)
tatctct putative PPT
tatatacttgtttttt TA-rich tract