1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtctgaaagttaatggacctataccctgagatgctttcatttttgtttatcatgtcatgtattctgaactatatgcaacttaccatatttattattttctagGACTAAATGTAAAACCACCTGCAGCAACTAGCAGACGTGTTAACGTACAGCAGGAACTATATGCACCAAGCCCAACGATCAGCCACAGAG
species | Oryza sativa |
transcript | LOC_Os01g51290.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TATTGTACTTCATCCGTCACAGTTACAAACCCCAAGACTCCAAAGCTTAG GACTAAATGTAAAACCACCTGCAGCAACTAGCAGACGTGTTAACATACAGCEST: gi|86423364|gb|CI060937.1|CI060937
genomic: TATTGTACTTCATCCGTCACAGTTACAAACCCCAAGACTCCAAAGCTTAGgtctgaaagt ... tattttctagGACTAAATGTAAAACCACCTGCAGCAACTAGCAGACGTGTTAACGTACAGC
EST: TCATCCGTCACAGTTACAAACCCCAAGACTCCAAAGCTTAG GACTAAATGTAAAACCACCTGCAGCAACTAGCAGACGTGTTAACGTACAGC
genomic: TCATCCGTCACAGTTACAAACCCCAAGACTCCAAAGCTTAGgtctgaaagt ... tattttctagGACTAAATGTAAAACCACCTGCAGCAACTAGCAGACGTGTTAACGTACAGC
tatcatgtcatgtattctgaactatatgcaacttaccatatttattattttctagGACTAAATGTAAAACCACCTGCAGCAACTAGCAGACGTGTTAACGTACAGCAGGAACTATATGCACCAAGCCCAACGATCAGCCACAGAG
aacttac putative branch site (score: 2)
ttattttct putative PPT
aacttaccatatttat TA-rich tract