1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatgtatatggaactgactgtgcattttcacaaaggaagtcatatgaccttgtcttgtctcgctctgatgactgaacatattttctttctgtttcccttagAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAG
species | Oryza sativa |
transcript | LOC_Os01g41630.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGGACAGAGGGGGGCGAGTTGTTTTGTTTGAAAGGACAGATGCCAAGGAT AATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCAT
genomic: GGGACAGAGGGGGGCGAGTTGTTTTGTTTGAAAGGACAGATGCCAAGGATgtatgtatat ... tttcccttagAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCAT
accttgtcttgtctcgctctgatgactgaacatattttctttctgtttcccttagAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAG
ctctgat putative branch site (score: 17)
catattttctttctgt putative PPT
aacatattttcttt TA-rich tract