Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatttactaatttctctttgtttcgttcaatgatgcaatgcaagaactgaatctttttctttgatccacagGTCCATTAGATCTCCCCTCATTCTTGTCAGACACAATCAGCATCGAGACGGCCGGCGGCGCAGTGACGCCGATGATCCCGAGGCGGAGCCGCTTGCCGGC

Basic information

species Oryza sativa
transcript LOC_Os01g33360.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgtttcgttcaatgatgcaatgcaagaactgaatctttttctttgatccacagGTCCATTAGATCTCCCCTCATTCTTGTCAGACACAATCAGCATCGAGACGGCCGGCGGCGCAGTGACGCCGATGATCCCGAGGCGGAGCCGCTTGCCGGC
                                          ctttgat  putative branch site (score: 5)
                                   tctttttctttgatcc  CT-rich tract
                                 aatcttttt  TA-rich tract