1 5' 3' | 2 5' 3' | 3 5' 3' |
...gaagtagaagtttatgacatgctattaagaaaatttaggtgaactaaatccttattatgccttttttgttttcttctgacacaattgtaagtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTGCGACAGCGACGAGCGGCTTCTCATCGCCGAGTTCATGCCCAACGACACC
species | Oryza sativa |
transcript | LOC_Os01g28989.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTGEST: gi|58694230|gb|CK082917.1|CK082917
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTGEST: gi|29623281|gb|CB628292.1|CB628292
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAACTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTGEST: gi|33683399|gb|CF311638.1|CF311638
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
aaatccttattatgccttttttgttttcttctgacacaattgtaagtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTGCGACAGCGACGAGCGGCTTCTCATCGCCGAGTTCATGCCCAACGACACC
ttctgac putative branch site (score: 2)
tttgttt putative PPT
ttttttgttttctt TA-rich tract