Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29663538|gb|CB659813.1|CB659813EST: TTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAG ATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGAC
genomic: TTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAGgtagtagcat ... ccatgcacagATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGAC
EST:
gi|29641829|gb|CB646836.1|CB646836EST: TTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAG ATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGAC
genomic: TTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAGgtagtagcat ... ccatgcacagATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGAC
EST:
gi|29641827|gb|CB646834.1|CB646834EST: TTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAG ATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTGGAC
genomic: TTAGGCCTTTGGAAGGCGCTTTCATTGTCAACGTGGGAGACATTCTTCAGgtagtagcat ... ccatgcacagATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtagtagcataatatacatttctttactcaacgctgcctgctagttgtttgatctaaactgaaactaaaactacactgtctgctgttgctgatggatttcccatgcatccatgcacagATATTCACAAACGGGAGGTACAAAAGTGCTGAGCACCGAGCTGTTGTCGACATGAAGAAAGAGCGGCTGTCTATAGCAGCCTTCCATTCTCCAAGTGTCC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA