1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaatatctttataatctctcttgcttgtcatttttcttctgtatgttaagtgacggttttttctattagcaagtttaacaagatatgaatgctatatatcaatagGTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCTGATGGTGAAGTCGAAATGAATACTATCCAAAACTGTCCTGTGCGCACCA
species | Oryza sativa |
transcript | LOC_Os01g15490.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTTTGAGGAAGTTGCCTTCAGCTTTAATGGTGGGAAGGATTCAACA GTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCTEST: gi|33676529|gb|CF304768.1|CF304768
genomic: GTTTGAGGAAGTTGCCTTCAGCTTTAATGGTGGGAAGGATTCAACAgtaatatctt ... atatcaatagGTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCT
EST: GTTTGAGGAAGTTGCCTTCAGCTTTAATGGTGGGAAGGATTCAACA GTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCTEST: gi|33677366|gb|CF305605.1|CF305605
genomic: GTTTGAGGAAGTTGCCTTCAGCTTTAATGGTGGGAAGGATTCAACAgtaatatctt ... atatcaatagGTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCT
EST: GTTTGAGGAAGTTGCCTTCAGCTTTAATGGTGGGAAGGATTCAACA GTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCT
genomic: GTTTGAGGAAGTTGCCTTCAGCTTTAATGGTGGGAAGGATTCAACAgtaatatctt ... atatcaatagGTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCT
tgacggttttttctattagcaagtttaacaagatatgaatgctatatatcaatagGTTCTGTTGCATTTACTTCGGGCTGGCTACTACCTCCACAAATCAAGCTCTGATGGTGAAGTCGAAATGAATACTATCCAAAACTGTCCTGTGCGCACCA
gtttaac putative branch site (score: 14)
ttttttctatta TA-rich tract