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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcagtcgatggatttgattcattcattacattcaccgacgactactctcgttatggatatatctatccaatcaaagaaagatctgaggcattagacaaatttaaaattttcaaagcagaagttgagaatcaacatgattgaaagatcaaaattgtaagGTCTGACCGTGGTGGTGAATACTATGGTAGACATACTACTTATGGTCAAATTCCTGGACCTTTTGCGAGGTTCTTACAGGAAAATGGCATTAAGGCCCAG

Basic information

species Oryza sativa
transcript LOC_Os01g02540.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaattttcaaagcagaagttgagaatcaacatgattgaaagatcaaaattgtaagGTCTGACCGTGGTGGTGAATACTATGGTAGACATACTACTTATGGTCAAATTCCTGGACCTTTTGCGAGGTTCTTACAGGAAAATGGCATTAAGGCCCAG
                                            aaaattgtaa  TA-rich tract