1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagtgcttaacaaagtctagtgttggaaggaatttgttactcactcactaacagggtgtcttctttccttgcttgttgcagGCTGCTGTACCAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAAACCAGCCAATGCTCCTGATTTGTTGTCTTTTGTCAATGATATCGAGTTC
species | Oryza sativa |
transcript | LOC_Os01g01040.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGTACGTGCTCAGTAGCTAGCTTGATACTCTTCGTTGGATTAGTCACTGT GCTGCTGTACCAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAAEST: gi|29616467|gb|CB621479.1|CB621479
genomic: GGTACGTGCTCAGTAGCTAGCTTGATACTCTTCGTTGGATTAGTCACTGTgtaagtgctt ... cttgttgcagGCTGCTGTACCAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAA
EST: GGTACGTGCTCAGTAGCTAGCTTGATACTCTTCGTTGGATTAGTCACTGT GCTGCTGTAC-AAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAA
genomic: GGTACGTGCTCAGTAGCTAGCTTGATACTCTTCGTTGGATTAGTCACTGTgtaagtgctt ... cttgttgcagGCTGCTGTACCAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAA
aaggaatttgttactcactcactaacagggtgtcttctttccttgcttgttgcagGCTGCTGTACCAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAAACCAGCCAATGCTCCTGATTTGTTGTCTTTTGTCAATGATATCGAGTTC
cactaac putative branch site (score: 1)
tgtcttctttccttgc putative PPT
atttgtta TA-rich tract