Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtagttagtgcagcgttggttgtggagcgcgatgaggacaatcctcatttgcgcacccccactctgtgctgacttggcccgggagcaagcagggaggagaggcccccgagtcgaacggtggcctaaggcccctgacgaccggagtcggccctctgcccgcttgtcagACGGTGCTGGGTGCCCCCGACCCTCAGGAAGGCCCCGAGGCCACTGCGGGAAGGCCGCACTTAACGCCCTTTGACCCCGAGGCTAACCCTGTGCTGACTC

Basic information

species Oryza sativa
transcript 13114.m00161
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaacggtggcctaaggcccctgacgaccggagtcggccctctgcccgcttgtcagACGGTGCTGGGTGCCCCCGACCCTCAGGAAGGCCCCGAGGCCACTGCGGGAAGGCCGCACTTAACGCCCTTTGACCCCGAGGCTAACCCTGTGCTGACTC
                 ccctgac  putative branch site (score: 3)
                                    ccctctgcccgctt  putative PPT