1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gttagcattgccattagacatgcaaattgcaaacacctctctggttttacgcttatcctgttcttgatcacattgctcggtttgcaattgcagCTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTACCGTGCGTCTTAAAACCGAAGTACCTGGCTGGTGATGAATCGAAGCCGGGGGC
species | Oryza sativa |
transcript | LOC_Os02g07760.1 |
intron # | 19 |
splice site | 3' |
intron type | U2 |
EST: CTGGCCTTGGGAGAGAAGGATCAAAATACGGCATGGACGAGTACCTGGAG CTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTACCGTEST: gi|88227449|gb|CI226929.1|CI226929
genomic: CTGGCCTTGGGAGAGAAGGATCAAAATACGGCATGGACGAGTACCTGGAGgttagcattg ... gcaattgcagCTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTACCGT
EST: CTGGCCTTGGGAGAGAAGGATCAAAATACGGCATGGACGAGTACCTGGAG CTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTACCGTEST: gi|218498992|gb|FG968229.1|FG968229
genomic: CTGGCCTTGGGAGAGAAGGATCAAAATACGGCATGGACGAGTACCTGGAGgttagcattg ... gcaattgcagCTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTACCGT
EST: CTGGCCTTGGGAGAGAAGGATCAAAATACGGCATGGACGAGTACCTGGAG CTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTA
genomic: CTGGCCTTGGGAGAGAAGGATCAAAATACGGCATGGACGAGTACCTGGAGgttagcattg ... gcaattgcagCTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTA
ctctggttttacgcttatcctgttcttgatcacattgctcggtttgcaattgcagCTCAAGTACATTTGCATGGGAAACCTGAACTGATCCACTTGAGAGTACCGTGCGTCTTAAAACCGAAGTACCTGGCTGGTGATGAATCGAAGCCGGGGGC
tcttgat putative branch site (score: 51)
tttta TA-rich tract