1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
...tcttacatgcgacagccaattctgttaccgccgctgatggcatttctgttcctttctctcttttttcttcttcttcttcttcttcttttttttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGAACCTTGAGATCCGCCACCGCAAATGCCCAGGTTGTGGCACCCCCTTTG
species | Oryza sativa |
transcript | LOC_Os10g41590.1 |
intron # | 18 |
splice site | 3' |
intron type | U2 |
EST: CTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|89178144|gb|CI391323.1|CI391323
genomic: CTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88287969|gb|CI512646.1|CI512646
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|86481915|gb|CI124548.1|CI124548
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|86890240|gb|CI321417.1|CI321417
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88301832|gb|CI503298.1|CI503298
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88907883|gb|CI090479.1|CI090479
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTCCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88293868|gb|CI507977.1|CI507977
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTNTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88275525|gb|CI396129.1|CI396129
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88565634|gb|CI496351.1|CI496351
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: GGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88265255|gb|CI369029.1|CI369029
genomic: GGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGC-AGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88485285|gb|CI422556.1|CI422556
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: ATGCAAGGCTATTCTCAAGTGTGGGGTGTGGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|86430665|gb|CI083088.1|CI083088
genomic: ATGCAAGGCTATTCTCAAGTGTGGGGTGT-GCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88996353|gb|CI389064.1|CI389064
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88435409|gb|CI509080.1|CI509080
genomic: AGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG TTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88215051|gb|CI214900.1|CI214900
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88565016|gb|CI495733.1|CI495733
genomic: AAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTNTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88262241|gb|CI365817.1|CI365817
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: ATGCAAGGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG TTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88379624|gb|CI501526.1|CI501526
genomic: ATGCAA-GGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88377958|gb|CI501227.1|CI501227
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|29681303|gb|CB677578.1|CB677578
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88483013|gb|CI420284.1|CI420284
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: ATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|87028074|gb|CI257234.1|CI257234
genomic: ATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAATAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88294027|gb|CI510335.1|CI510335
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCGAGGCTATTTTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88429721|gb|CI548918.1|CI548918
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88563762|gb|CI494479.1|CI494479
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88287558|gb|CI507448.1|CI507448
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTNTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88317955|gb|CI500926.1|CI500926
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88454816|gb|CI511788.1|CI511788
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88418481|gb|CI504105.1|CI504105
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88435097|gb|CI504439.1|CI504439
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88419042|gb|CI508995.1|CI508995
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGGTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88415879|gb|CI536033.1|CI536033
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88978225|gb|CI384699.1|CI384699
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88285214|gb|CI504885.1|CI504885
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTNTGGGGTGTGCTTCGACCGGCCGAAAGAG TTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88504585|gb|CI432091.1|CI432091
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: ATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88467648|gb|CI507073.1|CI507073
genomic: ATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88568375|gb|CI499092.1|CI499092
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTNTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCNTGATCACCAAATGCTTCCACTTATTCTGCTCNCCATGTATCCAGAGGEST: gi|86901313|gb|CI326156.1|CI326156
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTGTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTGTGCTCGCCATGTATCCAGAGGEST: gi|88467920|gb|CI509735.1|CI509735
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGNCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88287570|gb|CI507460.1|CI507460
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88564026|gb|CI494743.1|CI494743
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88504074|gb|CI431580.1|CI431580
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|86437107|gb|CI118829.1|CI118829
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|86479463|gb|CI122096.1|CI122096
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88378242|gb|CI503808.1|CI503808
genomic: AATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: CGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88565717|gb|CI496434.1|CI496434
genomic: CGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: TATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGEST: gi|88419096|gb|CI511248.1|CI511248
genomic: TATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
EST: ATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAG GTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
genomic: ATGCAAGGCTATTCTCAAGTGTGGGGTGTGCTTCGACCGGCCGAAAGAGgtgatgggcc ... tttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGG
ctgttcctttctctcttttttcttcttcttcttcttcttcttttttttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGAACCTTGAGATCCGCCACCGCAAATGCCCAGGTTGTGGCACCCCCTTTG
tttctctcttttttct CT-rich tract
ttcttctttttttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tcttacatgcgacagccaattctgttaccgccgctgatggcatttctgttcctttctctcttttttcttcttcttcttcttcttcttttttttttggcagGTCGTGATCACCAAATGCTTCCACTTATTCTGCTCGCCATGTATCCAGAGGAACCTTGAGATCCGCCACCGCAAATGCCCAGGTTGTGGCACCCCCTTTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- -tacatgc
- - - - - - - - - -ttctgtt
- - - - - - - - - - - - - - - - gctgatg