1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtgctctataagaatattttacatttctatgggctaattttttccaatagctgatctaacgagatgagttacattccagGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGCTAGCTCTCTTAGAGCCAAGGCACGTGAATCAGCAGTCCTGGAAAAGCTT
species | Oryza sativa |
transcript | LOC_Os04g46450.1 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: AGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAG GTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGCEST: gi|86437148|gb|CI118870.1|CI118870
genomic: AGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAGgtgctctata ... tacattccagGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGC
EST: AGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAG GTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGCEST: gi|29640914|gb|CB645921.1|CB645921
genomic: AGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAGgtgctctata ... tacattccagGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGC
EST: AGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAG GTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGC
genomic: AGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAGgtgctctata ... tacattccagGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGC
ttctatgggctaattttttccaatagctgatctaacgagatgagttacattccagGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGCTAGCTCTCTTAGAGCCAAGGCACGTGAATCAGCAGTCCTGGAAAAGCTT
atctaac putative branch site (score: 19)
taattttttccaata TA-rich tract