1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gcaagaaattttgttataaacctactctacatctgtaggagaattgcgtacctcatggattgatcttgaaatctcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGCTTCAGGCCCGTGTTAACGCACTGGGATCAACTGCCACTGTTATCACAT
species | Oryza sativa |
transcript | LOC_Os12g03470.2 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTTTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGEST: gi|86886795|gb|CI334709.1|CI334709
genomic: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: TGAAAATAGCTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTCATCCAGTGAGCCTCACGATCTCTGCAAGTGGGEST: gi|86864008|gb|CI332931.1|CI332931
genomic: TGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: CTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGEST: gi|86871078|gb|CI328280.1|CI328280
genomic: CTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: CATCTGCAATTACTTGGCAGGATTGTGAAAATAGCTTCTTAAGAGTAAAG ATTATAAACGTTGGGTCTGATCCATTGAGCCTCACGATCTCTGCAACTGGGEST: gi|86908591|gb|CI318942.1|CI318942
genomic: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: TCTGAAAATAGCTTCTTAAGAGGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAAGT-GEST: gi|15852244|gb|BI805040.1|BI805040
genomic: TCTGAAAATAGCTTCTTAAGA-GTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGG
EST: ATTACTT-GCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGEST: gi|86895695|gb|CI315979.1|CI315979
genomic: ATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: TTCTGAAAATAGCTTCTTAAGAGGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACT-GEST: gi|58690391|gb|CK079078.1|CK079078
genomic: TTCTGAAAATAGCTTCTTAAGA-GTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGG
EST: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGEST: gi|29667818|gb|CB664093.1|CB664093
genomic: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGEST: gi|29686128|gb|CB682403.1|CB682403
genomic: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: CATCTGCAATTACTTGGCAGGATTCTGAATATAGCTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGEST: gi|86882978|gb|CI314236.1|CI314236
genomic: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: CATCTGCAATTACGTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCATTGAGCCTCACGATCTCTGCAACTGGGEST: gi|86839190|gb|CI331473.1|CI331473
genomic: CATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
EST: CTTCTTAAGAGTAAAG ATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
genomic: CTTCTTAAGAGTAAAGgcaagaaatt ... tcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGG
acatctgtaggagaattgcgtacctcatggattgatcttgaaatctcctgtgcagATTATAAACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGCTTCAGGCCCGTGTTAACGCACTGGGATCAACTGCCACTGTTATCACAT
gattgat putative branch site (score: 4)
tctcctgt putative PPT
ttgaaat TA-rich tract