1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtgatttcactatcgcaagtcagttttcaaagatggaattcaaaatattttaatattccatttctgattattctctatatttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAGAGGTAGCCATTGTGAAACTATTGATCAAATCGTACTATGACATTGTCA
species | Oryza sativa |
transcript | LOC_Os04g31190.1 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAEST: gi|29668906|gb|CB665181.1|CB665181
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAEST: gi|29668903|gb|CB665178.1|CB665178
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAEST: gi|29668929|gb|CB665204.1|CB665204
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAEST: gi|29668930|gb|CB665205.1|CB665205
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAEST: gi|33802600|gb|CF327172.1|CF327172
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAEST: gi|29668904|gb|CB665179.1|CB665179
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
EST: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAG CCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
genomic: CACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGgtgatttcac ... ttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACA
gaattcaaaatattttaatattccatttctgattattctctatatttcttaccagCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAGAGGTAGCCATTGTGAAACTATTGATCAAATCGTACTATGACATTGTCA
ttctgat putative branch site (score: 4)
ttctctatatttctt putative PPT
aaaatattttaatatt TA-rich tract