1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
...tgtacacgtctcttggaatttaattgtgccatgccagcaacatcaatcttacaataagtcctcaacattgtcttctatctgtttttgtgaccctggccagGCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAATCTGGAAAAGGCTGGCCTATTTAAGCGCCAG
species | Oryza sativa |
transcript | LOC_Os04g14654.2 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAG GCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAAEST: gi|66928780|gb|CX115628.1|CX115628
genomic: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAGgtatgtttat ... ccctggccagGCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAA
EST: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAG GCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAAEST: gi|163917728|gb|EG711274.1|EG711274
genomic: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAGgtatgtttat ... ccctggccagGCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAA
EST: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAG GCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAAEST: gi|28298184|gb|CB238414.1|CB238414
genomic: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAGgtatgtttat ... ccctggccagGCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAA
EST: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAG GCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAA
genomic: CTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAGgtatgtttat ... ccctggccagGCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAA
atcttacaataagtcctcaacattgtcttctatctgtttttgtgaccctggccagGCGGGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAATCTGGAAAAGGCTGGCCTATTTAAGCGCCAG
atcttac putative branch site (score: 3)
acaataa TA-rich tract