1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaattctccattgtatttaggtcttaaccacttaagatatatgagattataacgctgaatttcataaattaacttcatgatagGTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATAAACCACCAATAGTTGCAGTACCTGAGCATATGTGCCACACTTAATCTTT
species | Oryza sativa |
transcript | LOC_Os02g13970.1 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: ACTGCTTTGACAAATCTTGACATG GTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATAEST: gi|29626260|gb|CB631271.1|CB631271
genomic: ACTGCTTTGACAAATCTTGACATGgtaattctcc ... ttcatgatagGTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATA
EST: AGAACATGTTAAATGCAGAACGCCCAACTGCTTTGACAAATCTTGACATG GTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATAEST: gi|88832514|gb|CI019455.1|CI019455
genomic: AGAACATGTTAAATGCAGAACGCCCAACTGCTTTGACAAATCTTGACATGgtaattctcc ... ttcatgatagGTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATA
EST: AGAACATGTTAAATGCAGAACGCCCAACTGCTTTGACAAATCTTGACATG GTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATAEST: gi|29623796|gb|CB628807.1|CB628807
genomic: AGAACATGTTAAATGCAGAACGCCCAACTGCTTTGACAAATCTTGACATGgtaattctcc ... ttcatgatagGTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATA
EST: AGAACATGTTAAATGCAGAACGCCCAACTGCTTTGACAAATCTTGACATG GTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATA
genomic: AGAACATGTTAAATGCAGAACGCCCAACTGCTTTGACAAATCTTGACATGgtaattctcc ... ttcatgatagGTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATA
cacttaagatatatgagattataacgctgaatttcataaattaacttcatgatagGTGCTTCTTGAACATGAACAGAATTACATAAATATGCAAGTCTGATTCATAAACCACCAATAGTTGCAGTACCTGAGCATATGTGCCACACTTAATCTTT
aattaac putative branch site (score: 18)
aatttcataaattaac TA-rich tract