1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtatataaccttcactcctggtacaatgcagtttgccagcatattcataactgaacaccaaggatctgaattataccaaccaaaaccttcactatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATGATCGACGGCGAAG
species | Oryza sativa |
transcript | LOC_Os10g25090.1 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88551028|gb|CI481048.1|CI481048
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88835728|gb|CI370833.1|CI370833
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|2317519|gb|C22573.1|C22573
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88558320|gb|CI488798.1|CI488798
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTTTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|2317518|gb|C22572.1|C22572
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: GCCAAATCCCTGGTCCCGTTTCGCAGACGTCATTGGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86507940|gb|CI150573.1|CI150573
genomic: -CCAAATCCCTG-TCCCGTTTCGCAGACGTCATTG-CGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88522065|gb|CI449798.1|CI449798
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86859741|gb|CI345403.1|CI345403
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86851183|gb|CI312584.1|CI312584
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86427833|gb|CI072930.1|CI072930
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88549279|gb|CI479155.1|CI479155
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86887376|gb|CI313279.1|CI313279
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88978580|gb|CI384925.1|CI384925
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: TGCCAAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTCCAAGCGCTGGTCEST: gi|88252526|gb|CI350954.1|CI350954
genomic: TGCC-AAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCCTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCACTGGTCEST: gi|86253208|gb|CI058133.1|CI058133
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86836264|gb|CI346245.1|CI346245
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88554263|gb|CI484430.1|CI484430
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88270600|gb|CI385858.1|CI385858
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTTCCCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTCCAAGCGCTGGTCEST: gi|89191033|gb|CI392886.1|CI392886
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86598931|gb|CI355548.1|CI355548
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88226798|gb|CI224783.1|CI224783
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88534105|gb|CI462799.1|CI462799
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88439313|gb|CI536285.1|CI536285
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86852287|gb|CI319222.1|CI319222
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTGGCAGACTTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88534580|gb|CI463314.1|CI463314
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88850243|gb|CI091736.1|CI091736
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88257127|gb|CI359515.1|CI359515
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86841816|gb|CI337466.1|CI337466
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88549036|gb|CI478886.1|CI478886
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|87004671|gb|CI300993.1|CI300993
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86545195|gb|CI185401.1|CI185401
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88541568|gb|CI470845.1|CI470845
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88265894|gb|CI376796.1|CI376796
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCACACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88836021|gb|CI371126.1|CI371126
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCCTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88255244|gb|CI354068.1|CI354068
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86903063|gb|CI324533.1|CI324533
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86885256|gb|CI317016.1|CI317016
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: GCAGACGTCATTGCGCTGTGTTTCCAG CCTGAGCCGGATTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCT-GTCEST: gi|86497623|gb|CI140256.1|CI140256
genomic: GCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88375583|gb|CI525677.1|CI525677
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|2317454|gb|C22508.1|C22508
genomic: CCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: TGCCAAATCCCTGTCCCGTTTNCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88538136|gb|CI467139.1|CI467139
genomic: TGCCAAATCCCTGTCCCGTTT-CGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88838032|gb|CI372600.1|CI372600
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCCCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88837821|gb|CI079181.1|CI079181
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88996983|gb|CI389649.1|CI389649
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86415385|gb|CI069788.1|CI069788
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86837636|gb|CI345814.1|CI345814
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88544348|gb|CI473046.1|CI473046
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86843430|gb|CI341482.1|CI341482
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88549675|gb|CI479582.1|CI479582
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86833373|gb|CI334967.1|CI334967
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCCCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCCCTGGTCEST: gi|88553858|gb|CI483997.1|CI483997
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|89191054|gb|CI392907.1|CI392907
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTTTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCCCTGGTCEST: gi|86885335|gb|CI317095.1|CI317095
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: TCCCAAATCCCTGTCCCGTTTCCCAGACGTCATTGCCCTGTAGTGTCCAG CCTGAGCCGGAGTTCAGACCCCCGATGTCTGAGGTGGTGCAAGCGCTGGTEST: gi|86882948|gb|CI314219.1|CI314219
genomic: TGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGT-GTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGT
EST: CTACCAAATCCCTGTCCCGTTTCGCATACGTCATTGCGCTGTGTTTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86842470|gb|CI335339.1|CI335339
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88381134|gb|CI525904.1|CI525904
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCTCTGTGTTTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88261961|gb|CI365537.1|CI365537
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88534128|gb|CI462824.1|CI462824
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88203910|gb|CI203759.1|CI203759
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGGGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86412966|gb|CI067371.1|CI067371
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88832864|gb|CI369754.1|CI369754
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88978536|gb|CI384909.1|CI384909
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCATTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGT-GTGCAAGCGCTGGTCEST: gi|88226800|gb|CI224785.1|CI224785
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|86870434|gb|CI320530.1|CI320530
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTTTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88261486|gb|CI365062.1|CI365062
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88545504|gb|CI475069.1|CI475069
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|89181312|gb|CI112818.1|CI112818
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88535716|gb|CI465417.1|CI465417
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88559901|gb|CI490517.1|CI490517
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|88969733|gb|CI383236.1|CI383236
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCCTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCEST: gi|87028904|gb|CI351207.1|CI351207
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
EST: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAG CCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
genomic: CTGCCAAATCCCTGTCCCGTTTCGCAGACGTCATTGCGCTGTGTGTCCAGgtatataacc ... actatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTC
cataactgaacaccaaggatctgaattataccaaccaaaaccttcactatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATGATCGACGGCGAAG
tcataac putative branch site (score: 25)
ccttcact putative PPT
tgaattata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatataaccttcactcctggtacaatgcagtttgccagcatattcataactgaacaccaaggatctgaattataccaaccaaaaccttcactatttcagCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATGATCGACGGCGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA