1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' |
...agcattctcaacttccttttcattgttgaagtacaggttatttcttatctgaattattgtgattgaactccacttgttacaatctgatgaattaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGAAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAATACAAACACCGC
species | Oryza sativa |
transcript | LOC_Os07g47530.2 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|58692536|gb|CK081223.1|CK081223
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|58660071|gb|CK048751.1|CK048751
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGNCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACACAGAGGCTCTGAAGATAGCGEST: gi|29632741|gb|CB637750.1|CB637750
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTGTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGEST: gi|58690470|gb|CK079157.1|CK079157
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|58652949|gb|CK041629.1|CK041629
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|58690512|gb|CK079199.1|CK079199
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|33675839|gb|CF304078.1|CF304078
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|58658063|gb|CK046743.1|CK046743
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|33675419|gb|CF303658.1|CF303658
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|29685521|gb|CB681796.1|CB681796
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|58660377|gb|CK049057.1|CK049057
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGEST: gi|33676430|gb|CF304669.1|CF304669
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
EST: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAG GATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
genomic: TCCTTTCAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGgtgtgttttt ... attaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCG
tatctgaattattgtgattgaactccacttgttacaatctgatgaattaatgcagGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGCTCTGAAGATAGCGAAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAATACAAACACCGC
aattaat putative branch site (score: 37)
atgaattaat TA-rich tract