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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggtgcatagagaagtgatagtaattcacagtcattgatgatagtatggatcattttcaattctttgcaatgtggtaatttggtttgctttaaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAACACTCTGATTCAATCATGTGCTGCTCC

Basic information

species Oryza sativa
transcript LOC_Os03g43930.2
intron # 15
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os03g43930.2 (Oryza sativa), 3'ss of exon 15
lower sequence: GRMZM2G423337_T01 (Zea mays), 3'ss of exon 8
--------------------------------------------ggtgcatagagaagtgatagtaattcacagtc-attgatgat--agtatggatcattttcaattcttt--------gcaatgt----ggtaatttg-gtttgctttaaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAACACTCTGATTCAATCATGTGCTGCTCC
| || || | | || | | || ||| || || || ||||| | | ||| | || |||| |||||| || | | || ||||| ||| |||||||||||||| || ||||| ||||| ||| | ||| |||||||| ||||||||||||| ||||||||||||| || || ||||||||||| |||
gtggaaactcttttctctcctgaatctggttagcaattttgagaattagttaaggaggcggcagcatgggttgacctatcgattattcagcctgaatcatgctacactctattcagttgtgcgatgtagttggtaatctgtggccacgttgaaattccagGTTCCACACTGGAGCCGAACTCCTCCGCACGGACACCCAATGCACGGATGCTTCCTTGAAAGCGCTGTGGCAACACTCGGACTCGATCATGTGCTGTTCC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|87040822|gb|CI195444.1|CI195444
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86481983|gb|CI124616.1|CI124616
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87036584|gb|CI191206.1|CI191206
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88197905|gb|CI197755.1|CI197755
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87036373|gb|CI190995.1|CI190995
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87039024|gb|CI193646.1|CI193646
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87039677|gb|CI194299.1|CI194299
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86480098|gb|CI122731.1|CI122731
EST:     GTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87037463|gb|CI192085.1|CI192085
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87016506|gb|CI273716.1|CI273716
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86855875|gb|CI271094.1|CI271094
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87039979|gb|CI194601.1|CI194601
EST:     ACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: ACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86827312|gb|CI270963.1|CI270963
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGACCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87037625|gb|CI192247.1|CI192247
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGGGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87036851|gb|CI191473.1|CI191473
EST:     TGGGAGGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: TGGGA-GGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86499474|gb|CI142107.1|CI142107
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|218503853|gb|FG970110.1|FG970110
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGATTCACAAAGCATGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88984269|gb|CI020184.1|CI020184
EST:     GTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87039801|gb|CI194423.1|CI194423
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGGGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86482094|gb|CI124727.1|CI124727
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86437481|gb|CI119203.1|CI119203
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87038610|gb|CI192649.1|CI192649
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86482556|gb|CI125189.1|CI125189
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87040080|gb|CI193289.1|CI193289
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88233296|gb|CI233145.1|CI233145
EST:     TTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: TTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86436847|gb|CI118569.1|CI118569
EST:     GCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87034732|gb|CI189356.1|CI189356
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88197640|gb|CI197490.1|CI197490
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87027472|gb|CI272237.1|CI272237
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87040785|gb|CI195407.1|CI195407
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|86478938|gb|CI121571.1|CI121571
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGTATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88983063|gb|CI020627.1|CI020627
EST:     ATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: ATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88198258|gb|CI198108.1|CI198108
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87037761|gb|CI192383.1|CI192383
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|25802926|gb|CA758887.1|CA758887
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87022878|gb|CI269814.1|CI269814
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|88197420|gb|CI196727.1|CI196727
EST:     GGATCTCCTAAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87041845|gb|CI196467.1|CI196467
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87036221|gb|CI190843.1|CI190843
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
EST: gi|87040859|gb|CI195481.1|CI195481
EST:     GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCG                         ATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC
genomic: GGATCTCCTGAGGCCCATACGCTTGCAAGGTGGATTGGGAGGAGCTACCGgtatgactat ... aaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggatcattttcaattctttgcaatgtggtaatttggtttgctttaaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAACACTCTGATTCAATCATGTGCTGCTCC
                                     tttgctttaaaattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ggtgcatagagaagtgatagtaattcacagtcattgatgatagtatggatcattttcaattctttgcaatgtggtaatttggtttgctttaaaatttcagATTCCACACTGGAGCGGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAACACTCTGATTCAATCATGTGCTGCTCC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT