1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtatttttactatcccactaaggaacatcgctgacacaactgaaattgaaataaccggccaggaaattctctcttgcagGTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGACTAGAGAATGGCATTCAGGAATTCGGGTCCATAAAGACGGTGCTTACAT
species | Oryza sativa |
transcript | LOC_Os03g20420.2 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAG GTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGAEST: gi|38477359|gb|CF961492.1|CF961492
genomic: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAGgtatttttac ... tctcttgcagGTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGA
EST: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAG GTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAEST: gi|29645169|gb|CB650176.1|CB650176
genomic: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAGgtatttttac ... tctcttgcagGTTGTCAATTTTGGTAACAAAGCTGTGAATCTTA
EST: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAG GTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGAEST: gi|29680538|gb|CB676813.1|CB676813
genomic: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAGgtatttttac ... tctcttgcagGTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGA
EST: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAG GTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGA
genomic: CTCTCACTTGGCAGAATTCTAACGATGGAAACACTTACTTGAAAATAAAGgtatttttac ... tctcttgcagGTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGA
acatcgctgacacaactgaaattgaaataaccggccaggaaattctctcttgcagGTTGTCAATTTTGGTAACAAAGCTGTGAATCTTAATATAGCTGTAGCTGGACTAGAGAATGGCATTCAGGAATTCGGGTCCATAAAGACGGTGCTTACAT
aaataac putative branch site (score: 2)
ttctctcttgc putative PPT
tgaaattgaaataa TA-rich tract