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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttcgtgctacttgctacttaacattatgaattgtggtgatcttaaattagttgtcggttagcttctgcatagtctgctgtcacatatgaatgctactcaacattgcttctgtttgagattgaaggctgcttgcaaactagtcacagagatatgtgaaattgtcttcgttgctaatattcccattctgtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGG

Basic information

species Oryza sativa
transcript LOC_Os02g32350.1
intron # 15
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g32350.1 (Oryza sativa), 3'ss of exon 15
lower sequence: GRMZM2G136296_T02 (Zea mays), 3'ss of exon 16
gttcgtgctacttgctacttaacattatgaattgtggtgatcttaaattagttgtcggttagcttctgcatagtctgctgtcacatatgaatgctactcaacattgcttctgtttgagattgaaggctgcttgcaaactagtcacagagatatgtgaaattgtcttcgttgctaatattcccattctgtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGG
                                                                                       | | | |     |||||    |   ||||       | | ||    ||| || |    ||| |  | ||   ||| ||||     | |  | | |    ||  | | |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||||| |||||||||||||||||||| ||||||||||
---------------------------------------------------------------------------------------taagtacag--aaacat-atgttaatttgttgacagacgatgtgatcaaccttg----agaaacctatg---ttggcttctaacattacctactctccttgcatctacagGAAGGCCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGACACTAGGGAGAGGAAGACGGCTCTCCAGAACCTGGAACAGTTCCAGGAGAAGGCAAAGAAGG

upper sequence: LOC_Os02g32350.1 (Oryza sativa), 3'ss of exon 15
lower sequence: AC207890.3_FGT002 (Zea mays), 3'ss of exon 15
gttcgtgctacttgctacttaacattatgaattgtggtgatcttaaattagttgtcggttagcttctgcatagtctgctgtcacatatgaatgctactcaacattgcttctgtttgagattgaaggctgcttgcaaactagtcacagagatatgtgaaattgtcttcgttgctaatattcccattctgtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGG
                                                                                      |||    | | | |         |||| |||   || |   ||   || |  | | |  ||  | ||||     | | |       ||   | | ||  |||  | | |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||| | ||||||||||| ||||||||||||||||| || ||||||||||
--------------------------------------------------------------------------------------atgtgatcaatttattggaaaacctgtgtgaagctgtattatg---gctatttggcc--aggaacatgt-----tatttctaacatta-cctactcaccctgcgtttacagGAAGGGCTTGCCCGGCTCGAAAGAAGCAAGAGATGGGACACTAGGGAGAGGAAGACGGCTCTCCAGAACCTGGAACAGTTCCAGGACAAGGCAAAGAAGG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86518089|gb|CI158295.1|CI158295
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86520457|gb|CI160663.1|CI160663
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87023222|gb|CI272050.1|CI272050
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86597091|gb|CI272686.1|CI272686
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|58679581|gb|CK068268.1|CK068268
EST:     CAGAGACAGAAACCAGCATCAATGCTACCATTCTTGAG                         GAAGGGCTTTCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|29625605|gb|CB630616.1|CB630616
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86519662|gb|CI159868.1|CI159868
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86481731|gb|CI124364.1|CI124364
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88263708|gb|CI366609.1|CI366609
EST:     CACTGGTTGACCCAGAGACAGAAACCAGCATCAATGCTACCATGCTTTAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86482129|gb|CI124762.1|CI124762
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89189299|gb|CI048838.1|CI048838
EST:     CCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88229425|gb|CI229301.1|CI229301
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86834990|gb|CI346470.1|CI346470
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89184180|gb|CI046745.1|CI046745
EST:     GAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87039053|gb|CI193675.1|CI193675
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88198106|gb|CI197956.1|CI197956
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87014058|gb|CI273248.1|CI273248
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88227061|gb|CI228541.1|CI228541
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGGG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|33810977|gb|CF331379.1|CF331379
EST:     GACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86480740|gb|CI123373.1|CI123373
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86902959|gb|CI312336.1|CI312336
EST:     TGGGTTGACGCAGAAGACAGAAACCAGCATCCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: T-GGTTGACGCAG-AGACAGAAACCAGCAT-CAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89190286|gb|CI392336.1|CI392336
EST:     GCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88232070|gb|CI231919.1|CI231919
EST:     GTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89189513|gb|CI049052.1|CI049052
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88230471|gb|CI230347.1|CI230347
EST:     AATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: AATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88234056|gb|CI233905.1|CI233905
EST:     GCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87016289|gb|CI271700.1|CI271700
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|7332410|gb|AU085756.1|AU085756
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86517757|gb|CI157963.1|CI157963
EST:     CACTGGTTGACGCAAAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|8856482|gb|AU093800.1|AU093800
EST:     CACTGGTTGACGCAGAGACAGAANCCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88232986|gb|CI232835.1|CI232835
EST:     ATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGGAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88229112|gb|CI228988.1|CI228988
EST:     TGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: TGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86481644|gb|CI124277.1|CI124277
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86514558|gb|CI157191.1|CI157191
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|300215650|gb|HO088276.1|HO088276
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86520079|gb|CI160285.1|CI160285
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86521185|gb|CI161391.1|CI161391
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86517508|gb|CI157714.1|CI157714
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86514139|gb|CI156772.1|CI156772
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86519099|gb|CI159305.1|CI159305
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86518642|gb|CI158848.1|CI158848
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86519092|gb|CI159298.1|CI159298
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88232933|gb|CI232177.1|CI232177
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86437036|gb|CI118758.1|CI118758
EST:     CACTGGTTGACCCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCCAAGAGATGGGATACTAGGGAGAG
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAG-CAAGAGATGGGATACTAGGGAGAG
EST: gi|88264514|gb|CI368288.1|CI368288
EST:     AGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: AGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86519141|gb|CI159347.1|CI159347
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|29623985|gb|CB628996.1|CB628996
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88957712|gb|CI095486.1|CI095486
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87037277|gb|CI191899.1|CI191899
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89175348|gb|CI042369.1|CI042369
EST:     ACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86514028|gb|CI156661.1|CI156661
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88231462|gb|CI231311.1|CI231311
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|300215670|gb|HO088296.1|HO088296
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86520361|gb|CI160567.1|CI160567
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGGAGCAAGAGATGGGATACTAGGGGGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86437656|gb|CI119576.1|CI119576
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87027610|gb|CI272375.1|CI272375
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|66920206|gb|CX107054.1|CX107054
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88991599|gb|CI019777.1|CI019777
EST:     CCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|33795625|gb|CF323682.1|CF323682
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88851148|gb|CI373906.1|CI373906
EST:     ACTGGTTGACGCAGAGACAGAAACCAGCATCAATGGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACTGGTTGACGCAGAGACAGAAACCAGCATCAATG-CTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88197474|gb|CI196781.1|CI196781
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88232863|gb|CI232107.1|CI232107
EST:     CCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88234107|gb|CI233956.1|CI233956
EST:     ATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|25801411|gb|CA757372.1|CA757372
EST:     CATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86479922|gb|CI122555.1|CI122555
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86518886|gb|CI159092.1|CI159092
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89169846|gb|CI110205.1|CI110205
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88229280|gb|CI229156.1|CI229156
EST:     GCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|29687923|gb|CB684198.1|CB684198
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86514543|gb|CI157176.1|CI157176
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|38476461|gb|CF960594.1|CF960594
EST:     CACTGGTTGACGCAGAGACAGAAACCACCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCG
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCG
EST: gi|87040172|gb|CI194794.1|CI194794
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|218501210|gb|FG955430.1|FG955430
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|33683618|gb|CF311857.1|CF311857
EST:     GCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: GCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88234037|gb|CI233886.1|CI233886
EST:     ATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88230828|gb|CI228733.1|CI228733
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|58679107|gb|CK067794.1|CK067794
EST:     ACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88235989|gb|CI235191.1|CI235191
EST:     CCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86538013|gb|CI178219.1|CI178219
EST:     ACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86521882|gb|CI162088.1|CI162088
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88229726|gb|CI229602.1|CI229602
EST:     ACAGAAACCAGCATCAATGCTACCATGCTTGGG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|29622119|gb|CB627130.1|CB627130
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88217209|gb|CI217058.1|CI217058
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88230832|gb|CI228737.1|CI228737
EST:     TTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: TTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|16754345|gb|BM038724.1|BM038724
EST:     ACTGG-TGACGCAGAGACAGAAACCAGCATCAATGTCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACTGGTTGACGCAGAGACAGAAACCAGCATCAATG-CTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|89195695|gb|CI393724.1|CI393724
EST:     ACCATGC-TGAG                         GAA-GGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: ACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|218485288|gb|FG957633.1|FG957633
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86520436|gb|CI160642.1|CI160642
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87036169|gb|CI190791.1|CI190791
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86514721|gb|CI157354.1|CI157354
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88235685|gb|CI234887.1|CI234887
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86519928|gb|CI160134.1|CI160134
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86866766|gb|CI343564.1|CI343564
EST:     ACCATGCTTTAG                         GAAAGGGCTTGCTCGGCTTGAAA-AAGCAAGAGATGGGATACTA-GGAGAG
genomic: ACCATGCTTGAGgttcgtgcta ... gtttatgcagG-AAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAG
EST: gi|86518208|gb|CI158414.1|CI158414
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88197642|gb|CI197492.1|CI197492
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88838278|gb|CI373638.1|CI373638
EST:     CACTGGGTGACCCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86517403|gb|CI157609.1|CI157609
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|86478773|gb|CI121406.1|CI121406
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87039757|gb|CI194379.1|CI194379
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|87040902|gb|CI195524.1|CI195524
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88271364|gb|CI387417.1|CI387417
EST:     CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: CACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
EST: gi|88234131|gb|CI233980.1|CI233980
EST:     TGCTACCATGCTTGAG                         GAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA
genomic: TGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 68 (upstream exon), 65 (downstream exon)
Score: 20

TTCTGGTGGAAAGTCCAAGGGACAAGGCACTGGAACTATTCTGATTGTTACACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGgttcgtgcta ... gtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cacagagatatgtgaaattgtcttcgttgctaatattcccattctgtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGG
                           tgctaat  putative branch site (score: 20)
                                   ttcccattctgttt  CT-rich tract
                              taatatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttcgtgctacttgctacttaacattatgaattgtggtgatcttaaattagttgtcggttagcttctgcatagtctgctgtcacatatgaatgctactcaacattgcttctgtttgagattgaaggctgcttgcaaactagtcacagagatatgtgaaattgtcttcgttgctaatattcccattctgtttatgcagGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCAA
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