1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtacgttcttcaacctcattttggttgctacttcttctgaattgtcttattcttccagctaactaccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATGTACTCATCAGCAAAAGTAATGCCTGGCAAATCAAAGTAAACAGTATTT
species | Oryza sativa |
transcript | LOC_Os01g72340.2 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCAT GCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATEST: gi|58596245|gb|CK006773.1|CK006773
genomic: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATgtacgttctt ... ccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
EST: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTGGTCCCTCAT GCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATEST: gi|58681122|gb|CK069809.1|CK069809
genomic: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATgtacgttctt ... ccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
EST: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCAT GCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATEST: gi|87012504|gb|CI307252.1|CI307252
genomic: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATgtacgttctt ... ccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
EST: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCAT GCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATEST: gi|86905446|gb|CI285409.1|CI285409
genomic: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATgtacgttctt ... ccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
EST: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCAT GCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATEST: gi|29677247|gb|CB673522.1|CB673522
genomic: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATgtacgttctt ... ccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
EST: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCAT GCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
genomic: TGGCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATgtacgttctt ... ccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCAT
ttggttgctacttcttctgaattgtcttattcttccagctaactaccattttcagGCGATAGCACTGCCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATGTACTCATCAGCAAAAGTAATGCCTGGCAAATCAAAGTAAACAGTATTT
agctaac putative branch site (score: 2)
ccattttc putative PPT
ttattctt TA-rich tract