1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gcaagtctcagatttccataaattctctcttttgctgaaactatctatctgctgagattttgatgcatctggtgttatgcttcggtccaaagcagATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATACTACATTGACAACCTTGTTG
species | Oryza sativa |
transcript | LOC_Os06g11190.1 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: GCTGGTTCTTCTTTATATGGG ATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATACEST: gi|29629333|gb|CB634344.1|CB634344
genomic: GCTGGTTCTTCTTTATATGGGgcaagtctca ... tccaaagcagATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATAC
EST: CTTGCCTTGCTTTTAGACAGATATTCAAGGCTGGTTCTTCTTTATATGGG ATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATACEST: gi|29625693|gb|CB630704.1|CB630704
genomic: CTTGCCTTGCTTTTAGACAGATATTCAAGGCTGGTTCTTCTTTATATGGGgcaagtctca ... tccaaagcagATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATAC
EST: CTTGCCTTGCTTTTAGACAGATATTCAAGGCTGGTTCTTCTTTATATGGG ATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATAC
genomic: CTTGCCTTGCTTTTAGACAGATATTCAAGGCTGGTTCTTCTTTATATGGGgcaagtctca ... tccaaagcagATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATAC
ctatctatctgctgagattttgatgcatctggtgttatgcttcggtccaaagcagATTGCTGACTTAGCTTCGTTGAGGGCAGGCATGCACAAGTTTGAGGCATACTACATTGACAACCTTGTTG
ttttgat putative branch site (score: 5)
attttgat TA-rich tract