1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtaagtgcacatctcactatttaagacgccgttgcctggaggcaggagtcctgcttatctataacttttaagtgtatatgtgtgctatatgtagcaattgcatgttttatgcagGTTGTTGCTTCTCAAGACTGGCCCGAGGTTACCAAGTATGCTGGTTTAATCAGTGTGCAAGCGTGCCACCAGGAGTCAATACAAGGTCTTTTTAAAGTCC
species | Oryza sativa |
transcript | LOC_Os02g07310.1 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: ATGTCACCCATCCACATCCAGGAAAAGCTAATAGTTCTTCCATTGCTGCT GTTGTTGCTTCTCAAGACTGGCCCGAGGTTACCAAGTATGCTGGTTTAATCEST: gi|58676390|gb|CK065077.1|CK065077
genomic: ATGTCACCCATCCACATCCAGGAAAAGCTAATAGTTCTTCCATTGCTGCTgtaagtgcac ... ttttatgcagGTTGTTGCTTCTCAAGACTGGCCCGAGGTTACCAAGTATGCTGGTTTAATC
EST: ATGTCACCCATCCACATCCAGGAAAAGCTAATAGTTCTTCCATTGCTGCT GTTGTTGCTTCTCAAGACTGGCCCGAGGTTACCAAGTATGCTGGTTTAATC
genomic: ATGTCACCCATCCACATCCAGGAAAAGCTAATAGTTCTTCCATTGCTGCTgtaagtgcac ... ttttatgcagGTTGTTGCTTCTCAAGACTGGCCCGAGGTTACCAAGTATGCTGGTTTAATC
tataacttttaagtgtatatgtgtgctatatgtagcaattgcatgttttatgcagGTTGTTGCTTCTCAAGACTGGCCCGAGGTTACCAAGTATGCTGGTTTAATCAGTGTGCAAGCGTGCCACCAGGAGTCAATACAAGGTCTTTTTAAAGTCC
ctataac putative branch site (score: 4)
ttttaagtgtatat TA-rich tract