Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttcttttaaaaaaaaatcaaattttaaactagttattttcagtattatcatttcttttttgtggtctactaattaatcttaaaccttcttaccatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGCCGATTGCTGAGAGATGCAAAACTGTTTGAGATTGGAGCCGGTACTAGTG

Basic information

species Oryza sativa
transcript LOC_Os05g03480.2
intron # 13
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g03480.5 (Oryza sativa), 3'ss of exon 11
lower sequence: GRMZM2G381051_T03 (Zea mays), 3'ss of exon 13
--ttcttttaaaaaaaaatcaaattttaaactagttattttcagtattatcatttcttttttgtggtctactaattaatct-taaaccttcttaccatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGCCGATTGCTGAGAGATGCAAAACTGTTTGAGATTGGAGCCGGTACTAGTG
    | |   |||  | | ||| ||||    |||  ||    |   | || ||||    | ||     |  ||  |  ||    |||  | |  | |||||||||||| |||||||||||||| || || ||||||||||||||||||||||| ||  | ||||||||||||||| ||||||||||||| |||||||||||||
aacacatcataaatcataacaagttttt--ttagaaataacgaac-tgataatttgcagtatgcatcattttatatgttccactaactctttctctatggcagGCAATCCAGTGTCTTGGTGGAAATGGGTACATAAATGAGTACCCAACTGGTCGTCTCCTGAGAGATGCAAAATTGTTTGAGATTGGTGCCGGTACTAGTG

upper sequence: LOC_Os05g03480.5 (Oryza sativa), 3'ss of exon 11
lower sequence: GRMZM2G052630_T01 (Zea mays), 3'ss of exon 12
---ttcttttaaaaaaaaatcaaattttaaactagttattttcagtattatcatttcttttttgtggtctactaattaatcttaaaccttcttaccatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGCCGATTGCTGAGAGATGCAAAACTGTTTGAGATTGGAGCCGGTACTAGTG
    || |   |  |    | ||||||| ||||| |  |||  |||||   ||    |||| | || || ||||| |  || |||  ||| | || ||||||||| || |||||||||||||| || || ||||||||||||||||||||||| ||  | ||||||||||||||| ||||||||||||| || |||||||| |
taaatcataacaggattttttaaattttgaactaatattttgtagtatg--caccatttttatatgttccactaactcttcataactctt-tcactatggcagGCGATCCAGTGTCTTGGTGGAAATGGGTACATAAATGAGTACCCAACTGGTCGTCTCCTGAGAGATGCAAAATTGTTTGAGATTGGTGCTGGTACTAGCG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86428807|gb|CI075488.1|CI075488
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|15855456|gb|BI808268.1|BI808268
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GC-ATACACGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGG
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACA-GTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGG
EST: gi|29661230|gb|CB657505.1|CB657505
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|89193724|gb|CI116357.1|CI116357
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88829281|gb|CI074151.1|CI074151
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29680250|gb|CB676525.1|CB676525
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86259889|gb|CI065762.1|CI065762
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88485161|gb|CI422432.1|CI422432
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|18386365|gb|BM419563.1|BM419563
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88418357|gb|CI548638.1|CI548638
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88477116|gb|CI414387.1|CI414387
EST:     AGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: AGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86592394|gb|CI251048.1|CI251048
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29672430|gb|CB668705.1|CB668705
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88438741|gb|CI546223.1|CI546223
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88489111|gb|CI426383.1|CI426383
EST:     CAACCCA-GTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29668356|gb|CB664631.1|CB664631
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88833713|gb|CI077194.1|CI077194
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29674357|gb|CB670632.1|CB670632
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTTTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86911502|gb|CI317678.1|CI317678
EST:     TGATTCTCTTTGCTGCTGAAAGGGCAACCCACGGTTGCACTTCAG                         GCAATACA-TGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: TGATTCTCTTTGCTGCTGAAAGGGCAACCCA-GGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|33683927|gb|CF312166.1|CF312166
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88482013|gb|CI419284.1|CI419284
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86428674|gb|CI075355.1|CI075355
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|89184274|gb|CI046839.1|CI046839
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86823798|gb|CI258824.1|CI258824
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|18387595|gb|BM420793.1|BM420793
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88471675|gb|CI408946.1|CI408946
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88452556|gb|CI558217.1|CI558217
EST:     TGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: TGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29644599|gb|CB649606.1|CB649606
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29643546|gb|CB648553.1|CB648553
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86488039|gb|CI130672.1|CI130672
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACNCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29637531|gb|CB642540.1|CB642540
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29673823|gb|CB670098.1|CB670098
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29641739|gb|CB646746.1|CB646746
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88277231|gb|CI398033.1|CI398033
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCCACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86252415|gb|CI056152.1|CI056152
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|22307242|gb|BQ908464.1|BQ908464
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|87026900|gb|CI259553.1|CI259553
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAGCTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|12405338|gb|AU166939.1|AU166939
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88851407|gb|CI404459.1|CI404459
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|16753672|gb|BM038051.1|BM038051
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCA-CGGATACATAAATGAGTACCCA-CTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29663217|gb|CB659492.1|CB659492
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86429655|gb|CI076336.1|CI076336
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29657681|gb|CB653956.1|CB653956
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29669234|gb|CB665509.1|CB665509
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29670747|gb|CB667022.1|CB667022
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|22306117|gb|BQ907339.1|BQ907339
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCA-CTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86259763|gb|CI065636.1|CI065636
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACTCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29672136|gb|CB668411.1|CB668411
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29675357|gb|CB671632.1|CB671632
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88487005|gb|CI424276.1|CI424276
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGNTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88323984|gb|CI561393.1|CI561393
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88253465|gb|CI352091.1|CI352091
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29683358|gb|CB679633.1|CB679633
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29664111|gb|CB660386.1|CB660386
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|22307122|gb|BQ908344.1|BQ908344
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCC-ACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|15858385|gb|BI811197.1|BI811197
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GC-ATACAGTGTCTTGGTGGCACACGGATACATAAATGAGTACCC-ACTGG
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCA-ACGGATACATAAATGAGTACCCAACTGG
EST: gi|88560106|gb|CI490737.1|CI490737
EST:     TGGTGTGATTCTCTTTGGCTGCTGAAAGGGCAACCCAGNTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: TGGTGTGATTCTCTTT-GCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88489063|gb|CI426334.1|CI426334
EST:     CTGGTNTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTTTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88834472|gb|CI077755.1|CI077755
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88485441|gb|CI422712.1|CI422712
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|55440359|gb|CV733489.1|CV733489
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29663209|gb|CB659484.1|CB659484
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88269544|gb|CI380842.1|CI380842
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29672648|gb|CB668923.1|CB668923
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29667481|gb|CB663756.1|CB663756
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88837225|gb|CI078585.1|CI078585
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86412887|gb|CI067292.1|CI067292
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|58594804|gb|CF993112.1|CF993112
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|22306512|gb|BQ907734.1|BQ907734
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29642661|gb|CB647668.1|CB647668
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29642659|gb|CB647666.1|CB647666
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86425023|gb|CI070120.1|CI070120
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|55440357|gb|CV733488.1|CV733488
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|33677636|gb|CF305875.1|CF305875
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29680932|gb|CB677207.1|CB677207
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|89173649|gb|CI041542.1|CI041542
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29664257|gb|CB660532.1|CB660532
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|33683926|gb|CF312165.1|CF312165
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCANGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|18386948|gb|BM420146.1|BM420146
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29665695|gb|CB661970.1|CB661970
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTTCCCACCTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88275494|gb|CI395345.1|CI395345
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTTTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29661040|gb|CB657315.1|CB657315
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29679285|gb|CB675560.1|CB675560
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86866433|gb|CI343411.1|CI343411
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29664204|gb|CB660479.1|CB660479
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|18386397|gb|BM419595.1|BM419595
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29663798|gb|CB660073.1|CB660073
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88450451|gb|CI544573.1|CI544573
EST:     ATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: ATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88828952|gb|CI073822.1|CI073822
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29637680|gb|CB642689.1|CB642689
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29671621|gb|CB667896.1|CB667896
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86260123|gb|CI065996.1|CI065996
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86486584|gb|CI129217.1|CI129217
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88990521|gb|CI107908.1|CI107908
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86412650|gb|CI067055.1|CI067055
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88851348|gb|CI404400.1|CI404400
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29678948|gb|CB675223.1|CB675223
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29669119|gb|CB665394.1|CB665394
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88297484|gb|CI547962.1|CI547962
EST:     TCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAATGTCTTGGTGGCAACGGATACATAAATGAGTACCCAAATGGC
genomic: TCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29661172|gb|CB657447.1|CB657447
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29680495|gb|CB676770.1|CB676770
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86488910|gb|CI131543.1|CI131543
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86413137|gb|CI067542.1|CI067542
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29658318|gb|CB654593.1|CB654593
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86427552|gb|CI072649.1|CI072649
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACTCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|89184088|gb|CI046653.1|CI046653
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|18386437|gb|BM419635.1|BM419635
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGACTACATAAATGAGTACCCA-CTGG
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGA-TACATAAATGAGTACCCAACTGG
EST: gi|86859919|gb|CI321909.1|CI321909
EST:     CTGG-GTGATTCTCTATGCTGCTGAAAGGACAACCCAGGTTGCACTTCAG                         GCAATACAG-GTCTTGGTGCCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86436256|gb|CI117978.1|CI117978
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCCACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88993293|gb|CI257721.1|CI257721
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88831435|gb|CI083829.1|CI083829
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|86536936|gb|CI177142.1|CI177142
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88476641|gb|CI413912.1|CI413912
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|89185669|gb|CI047538.1|CI047538
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|88484799|gb|CI422070.1|CI422070
EST:     CTGGTNTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTTTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
EST: gi|29661525|gb|CB657800.1|CB657800
EST:     CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAG                         GCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC
genomic: CTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGgtgaaaacct ... accatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatcatttcttttttgtggtctactaattaatcttaaaccttcttaccatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGCCGATTGCTGAGAGATGCAAAACTGTTTGAGATTGGAGCCGGTACTAGTG
                                      ccttcttacc  CT-rich tract
                     tactaattaatcttaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ttcttttaaaaaaaaatcaaattttaaactagttattttcagtattatcatttcttttttgtggtctactaattaatcttaaaccttcttaccatggcagGCAATACAGTGTCTTGGTGGCAACGGATACATAAATGAGTACCCAACTGGCCGATTGCTGAGAGATGCAAAACTGTTTGAGATTGGAGCCGGTACTAGTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG