1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaatctagtcactgcgatacttaagcattcactggagacaattttgtgaaattttatactaaaagtaaaatatatatgcctaatatcttcagGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTGA
species | Oryza sativa |
transcript | LOC_Os01g12660.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: CGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTG GAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAAEST: gi|88242213|gb|CI242062.1|CI242062
genomic: CGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGgtaatctagt ... atatcttcagGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAA
EST: ATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTG GAGAAGAAGCGGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAEST: gi|66917644|gb|CX104492.1|CX104492
genomic: ATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGgtaatctagt ... atatcttcagGAGAAGAAGC-GGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAA
EST: CGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTG GAGAAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGEST: gi|88265156|gb|CI368930.1|CI368930
genomic: CGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGgtaatctagt ... atatcttcagGAGAAGAAG---CGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATG
EST: AGTATCGTCCAATGAGGGAACTGATCCCAAAGGAAAGAAAGAAGGAACTT GAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGGTTCGAAGAT-AAAEST: gi|88504916|gb|CI432422.1|CI432422
genomic: -GTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGgtaatctagt ... atatcttcagGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAA
EST: CGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTG GAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAA
genomic: CGTATCGTCCAGTGAGGGAACTGATCCAAAAGGAAAGAAAGAAGGAACTGgtaatctagt ... atatcttcagGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAA
acaattttgtgaaattttatactaaaagtaaaatatatatgcctaatatcttcagGAGAAGAAGCGGGAACAAGGAGGCAATGCTTCAGATGCTTCGAAGATGAAAGAGAAGGACGAGACGATCATACTAAGGCCACTAAACATGAAAGATTTGA
tatcttc CT-rich tract
aaattttatactaaaa TA-rich tract