1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtaatgttgtaattgagtccttgtaggcttgtagctccttttccacaatgaatggcaaatattaatgcatcaacctggcattctgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGCTTCTATCACGGGATATGTACCTTCTACAG
species | Oryza sativa |
transcript | LOC_Os12g41860.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAG TTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGEST: gi|58682326|gb|CK071013.1|CK071013
genomic: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGgtaatgttgt ... tgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTG
EST: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAG TTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGEST: gi|58684992|gb|CK073679.1|CK073679
genomic: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGgtaatgttgt ... tgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTG
EST: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAG TTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGEST: gi|58687044|gb|CK075731.1|CK075731
genomic: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGgtaatgttgt ... tgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTG
EST: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAG TTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGEST: gi|58665252|gb|CK053938.1|CK053938
genomic: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGgtaatgttgt ... tgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTG
EST: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAG TTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTG
genomic: TGGGCAGTCAGGTTATACTACCCCTCGCTCATACCTTAGAGCATGAAGAGgtaatgttgt ... tgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTG
ttttccacaatgaatggcaaatattaatgcatcaacctggcattctgaattgcagTTCTTGGAGGTTATTAGGCTCGAAGGACATGGTTTCAGCCATGATGAGGTGCTTCTATCACGGGATATGTACCTTCTACAG
tattaat putative branch site (score: 8)
aaatattaatgcat TA-rich tract