1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtacgaaacaaatgaaacctcttttgcaccataagttgaatatatatctttgttatcctgagaactgatactcttatcttctttcatgaagGTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCAACTGAACAA
species | Oryza sativa |
transcript | LOC_Os12g29550.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: GTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAA GTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCAEST: gi|29666115|gb|CB662390.1|CB662390
genomic: GTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAAgtacgaaaca ... tttcatgaagGTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCA
EST: GTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAA GTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCAEST: gi|58595569|gb|CK006097.1|CK006097
genomic: GTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAAgtacgaaaca ... tttcatgaagGTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCA
EST: GTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAA GTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCA
genomic: GTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAAgtacgaaaca ... tttcatgaagGTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCA
tgaatatatatctttgttatcctgagaactgatactcttatcttctttcatgaagGTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCAACTGAACAA
aactgat putative branch site (score: 47)
tactcttatcttcttt CT-rich tract
atatatctttgttat TA-rich tract