1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gcaagtttgactcgcatttatcctgcattttcttttggccttttgccagataaccccttttcatgacgagactttctccatgcagGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCG
species | Oryza sativa |
transcript | LOC_Os11g38610.2 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAG GAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCEST: gi|87014789|gb|CI269496.1|CI269496
genomic: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGgcaagtttga ... ctccatgcagGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTC
EST: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAG GAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCEST: gi|86477543|gb|CI120176.1|CI120176
genomic: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGgcaagtttga ... ctccatgcagGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTC
EST: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAG GAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGCTTCEST: gi|86480401|gb|CI123034.1|CI123034
genomic: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGgcaagtttga ... ctccatgcagGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTC
EST: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAG GAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTC
genomic: GAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGgcaagtttga ... ctccatgcagGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTC
tcttttggccttttgccagataaccccttttcatgacgagactttctccatgcagGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCG
agataac putative branch site (score: 5)
ctttctccat putative PPT
ttttcat TA-rich tract