1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaatactacatccttcaacttcaacaccacttaactcaaaattaaaccaaagttactactagagccggctactgctagagccagctatctaatgatgatctgacaagagctcttcacacttgtgtagACAATAGCGGATGCAGTTGGAGATTGGTTCTACGACCGCAATCCGTTTCAGAAGATTGATTGCCCTTACCCTTGCGATTCAACCTGCCACAACCGAATCT
species | Oryza sativa |
transcript | LOC_Os02g47400.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: AGACGCAGGAGACATGGTTTGCATCTGGTTCCCCCATGCTTGAAACCAAA ACAAATAGCGGATEST: gi|86884559|gb|CI337127.1|CI337127
genomic: AGACGCAGGAGACATGGTTTGCATCTGGTTCCCCCATGCTTGAAACCAAAgtaatactac ... acttgtgtagACAA-TAGCGGAT
EST: AGACGCAGGAGACATGGTTTGCATCTGGTTCCCCCATGCTTGAAACCAAA ACAATAGCGGATGCAGTTGGAGATTGGTTCTACGACCCCAATCCGTTTCAG
genomic: AGACGCAGGAGACATGGTTTGCATCTGGTTCCCCCATGCTTGAAACCAAAgtaatactac ... acttgtgtagACAATAGCGGATGCAGTTGGAGATTGGTTCTACGACCGCAATCCGTTTCAG
tgctagagccagctatctaatgatgatctgacaagagctcttcacacttgtgtagACAATAGCGGATGCAGTTGGAGATTGGTTCTACGACCGCAATCCGTTTCAGAAGATTGATTGCCCTTACCCTTGCGATTCAACCTGCCACAACCGAATCT
atctgac putative branch site (score: 3)
tatctaat TA-rich tract