1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtactattccttgtctttgtgataaatactgacccttgcatcccaactactagatataattgtggataagccacttgaatgaaacggttgctgcatgacttaacaacatcctcttttctgtacctcagGGTTGGATAATGTCAGAATCACTGCTCAACCCTGGGAAAGCTCGGTTGTGTCCTGCAAGGCCATAATGATTTTACTGTTACTGGGATGGCAATATCTTTC
species | Oryza sativa |
transcript | LOC_Os01g66350.1 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: AAATTGTTTCTTCCTCTTATGGAACTTTCAAGAAGAAAGCTAGAGAACAG GGTTGGATAATGTCAGAATCACTGCTCAACCCTGGGAAAGCTCGGTTGTGT
genomic: AAATTGTTTCTTCCTCTTATGGAACTTTCAAGAAGAAAGCTAGAGAACAGgtactattcc ... tgtacctcagGGTTGGATAATGTCAGAATCACTGCTCAACCCTGGGAAAGCTCGGTTGTGT
cttgaatgaaacggttgctgcatgacttaacaacatcctcttttctgtacctcagGGTTGGATAATGTCAGAATCACTGCTCAACCCTGGGAAAGCTCGGTTGTGTCCTGCAAGGCCATAATGATTTTACTGTTACTGGGATGGCAATATCTTTC
acttaac putative branch site (score: 48)
tcctcttttctgtacc putative PPT
ttaacaa TA-rich tract