1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtgaaaaatttgtaatttgtaaatgtatagtttacccatctgatcaaggccttattaacaaatatttttctaaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCGATCCTTGATCAATCT
species | Oryza sativa |
transcript | LOC_Os09g07510.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|29658916|gb|CB655191.1|CB655191
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATATTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86435837|gb|CI107070.1|CI107070
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|18386129|gb|BM419328.1|BM419328
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88375032|gb|CI523297.1|CI523297
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58693179|gb|CK081866.1|CK081866
genomic: ATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88908429|gb|CI091022.1|CI091022
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88233678|gb|CI233527.1|CI233527
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ACCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58611289|gb|CK039001.1|CK039001
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|29641703|gb|CB646710.1|CB646710
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|38476835|gb|CF960968.1|CF960968
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATEST: gi|18385652|gb|BM418851.1|BM418851
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACAT
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCCAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88842737|gb|CI371637.1|CI371637
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: GCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86432215|gb|CI085826.1|CI085826
genomic: GCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88226167|gb|CI226083.1|CI226083
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88270566|gb|CI385824.1|CI385824
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGTACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCACGGCACTTATACEST: gi|88957198|gb|CI095184.1|CI095184
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCA-GGCACTTATAC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|22305543|gb|BQ906751.1|BQ906751
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: GTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58694273|gb|CK082960.1|CK082960
genomic: GTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|25806838|gb|CA762799.1|CA762799
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88848603|gb|CI087125.1|CI087125
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|89185746|gb|CI047615.1|CI047615
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58682290|gb|CK070977.1|CK070977
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86251810|gb|CI019002.1|CI019002
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGGTTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|87041657|gb|CI196279.1|CI196279
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88964714|gb|CI070060.1|CI070060
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|87017349|gb|CI301385.1|CI301385
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGEST: gi|86415586|gb|CI029597.1|CI029597
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAG
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86826738|gb|CI364259.1|CI364259
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: AACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86490943|gb|CI133576.1|CI133576
genomic: AACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|29642127|gb|CB647134.1|CB647134
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|87041898|gb|CI196520.1|CI196520
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCCGCAGGCACTTATACCEST: gi|88214319|gb|CI214168.1|CI214168
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88275045|gb|CI395649.1|CI395649
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: TAATTCGTCAAA-GACAG AGTGCCAAACATCAAATTCAATGTTGC-AAGGTTCTGCAGGCACTTATACCEST: gi|87038212|gb|CI192834.1|CI192834
genomic: TAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88850387|gb|CI093068.1|CI093068
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58677559|gb|CK066246.1|CK066246
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCCAACATCCAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58687550|gb|CK076237.1|CK076237
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|87036423|gb|CI191045.1|CI191045
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88970813|gb|CI385422.1|CI385422
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: CTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|109712498|gb|CI105106.1|CI105106
genomic: CTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86252938|gb|CI057863.1|CI057863
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: GTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88985143|gb|CI006797.1|CI006797
genomic: GTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|89185684|gb|CI047553.1|CI047553
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86827380|gb|CI272801.1|CI272801
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|87041468|gb|CI196090.1|CI196090
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88850472|gb|CI093153.1|CI093153
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACGG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86824992|gb|CI358178.1|CI358178
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAA-GTTCTGCAGGCACTTATACCEST: gi|58663458|gb|CK052144.1|CK052144
genomic: ACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|29667131|gb|CB663406.1|CB663406
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|58685311|gb|CK073998.1|CK073998
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86486139|gb|CI128772.1|CI128772
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTCCAGGCACTTATACCEST: gi|86484706|gb|CI127339.1|CI127339
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88961182|gb|CI096586.1|CI096586
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|29621783|gb|CB626794.1|CB626794
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86603981|gb|CI114755.1|CI114755
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: TAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88266211|gb|CI377113.1|CI377113
genomic: TAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: TGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88226574|gb|CI226490.1|CI226490
genomic: TGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGGTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|10794822|gb|AU108788.1|AU108788
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|87039324|gb|CI193946.1|CI193946
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCCGCAGGCACTTATACCEST: gi|86899096|gb|CI296244.1|CI296244
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTEST: gi|88969914|gb|CI383416.1|CI383416
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGT
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88251971|gb|CI350399.1|CI350399
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: CACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|89162822|gb|CI099712.1|CI099712
genomic: CACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88957286|gb|CI095262.1|CI095262
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86414361|gb|CI068764.1|CI068764
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86878790|gb|CI340633.1|CI340633
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88974279|gb|CI019952.1|CI019952
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGGTTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88250536|gb|CI348766.1|CI348766
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|8857541|gb|AU094859.1|AU094859
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATNCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|89195046|gb|CI051159.1|CI051159
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88295785|gb|CI532746.1|CI532746
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: CCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|88971726|gb|CI388969.1|CI388969
genomic: CCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: TTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86431436|gb|CI085047.1|CI085047
genomic: TTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|33678826|gb|CF307065.1|CF307065
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|29621782|gb|CB626793.1|CB626793
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCEST: gi|86889276|gb|CI315887.1|CI315887
genomic: ATCACTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: GTCAACAGCTGCTCCCTGTTTTGATTAATTCCTCAAAGGACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGACACTTATACCEST: gi|88266571|gb|CI377473.1|CI377473
genomic: GTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
EST: CTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAA-GACAG AGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
genomic: CTTGTCAACAGCTGCTCCCTGTTGTGATTAATTCCTCAAAGGACAGgtgaaaaatt ... taaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACC
tatagtttacccatctgatcaaggccttattaacaaatatttttctaaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCGATCCTTGATCAATCT
tatttttct CT-rich tract
ttattaacaaatattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgaaaaatttgtaatttgtaaatgtatagtttacccatctgatcaaggccttattaacaaatatttttctaaatttcagAGTGCCAAACATCAAATTCAATGTTGCGAAGGTTCTGCAGGCACTTATACCGATCCTTGATCAATCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG