1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtatgtctcttcttattccctttcccctccactgtccatcctttataagtgttgataatcattttactatctttctgtcagGTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGTCTTGAAAAGGACAGCAT
species | Oryza sativa |
transcript | LOC_Os08g10600.3 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CTACTGAAATAAATCAAGGCACAGGGCGCCTTCGTTATTGTTGGAGCAAT GTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGTEST: gi|29685401|gb|CB681676.1|CB681676
genomic: CTACTGAAATAAATCAAGGCACAGGGCGCCTTCGTTATTGTTGGAGCAATgtatgtctct ... tttctgtcagGTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGT
EST: CTTCGTTATTGTTGGAGCAAT GTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGTEST: gi|29674853|gb|CB671128.1|CB671128
genomic: CTTCGTTATTGTTGGAGCAATgtatgtctct ... tttctgtcagGTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGT
EST: GTTGGAGCAAT GTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGT
genomic: GTTGGAGCAATgtatgtctct ... tttctgtcagGTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGT
ctccactgtccatcctttataagtgttgataatcattttactatctttctgtcagGTATGCCTGCATATGTTTACTTTGGATTTTCTTAATCAAGTAACAAATAGTCTTGAAAAGGACAGCAT
tgttgat putative branch site (score: 4)
ttttactatctttct putative PPT
ataatcattttactat TA-rich tract